Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.62■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.61■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.61■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.61■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Gm18284-201ENSMUST00000172604 624 ntBASIC20.6■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.6■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.58■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.57■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Gm10493-201ENSMUST00000097270 612 ntBASIC20.57■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.57■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.56■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.55■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Gm8495-201ENSMUST00000188740 694 ntBASIC20.55■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Gm5874-201ENSMUST00000096101 508 ntBASIC20.55■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.55■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.55■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.54■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.54■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.53■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.52■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.52■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Mindy4b-psA0A1W2P7H6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms