Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cfap99A0A140LIX9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cfap99A0A140LIX9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC23.27■■□□□ 1.32
Cfap99A0A140LIX9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cfap99A0A140LIX9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cfap99A0A140LIX9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cfap99A0A140LIX9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cfap99A0A140LIX9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cfap99A0A140LIX9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC23.26■■□□□ 1.31
Cfap99A0A140LIX9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cfap99A0A140LIX9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cfap99A0A140LIX9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cfap99A0A140LIX9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cfap99A0A140LIX9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cfap99A0A140LIX9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC23.26■■□□□ 1.31
Cfap99A0A140LIX9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cfap99A0A140LIX9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cfap99A0A140LIX9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cfap99A0A140LIX9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Cfap99A0A140LIX9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cfap99A0A140LIX9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cfap99A0A140LIX9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.25■■□□□ 1.31
Cfap99A0A140LIX9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.25■■□□□ 1.31
Cfap99A0A140LIX9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cfap99A0A140LIX9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cfap99A0A140LIX9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cfap99A0A140LIX9 Notumos-201ENSMUST00000151998 2659 ntBASIC23.25■■□□□ 1.31
Cfap99A0A140LIX9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC23.25■■□□□ 1.31
Cfap99A0A140LIX9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cfap99A0A140LIX9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cfap99A0A140LIX9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cfap99A0A140LIX9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Cfap99A0A140LIX9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC23.24■■□□□ 1.31
Cfap99A0A140LIX9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cfap99A0A140LIX9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Cfap99A0A140LIX9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cfap99A0A140LIX9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cfap99A0A140LIX9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cfap99A0A140LIX9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cfap99A0A140LIX9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cfap99A0A140LIX9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cfap99A0A140LIX9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cfap99A0A140LIX9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cfap99A0A140LIX9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cfap99A0A140LIX9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cfap99A0A140LIX9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cfap99A0A140LIX9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cfap99A0A140LIX9 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.22■■□□□ 1.31
Cfap99A0A140LIX9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC23.22■■□□□ 1.31
Cfap99A0A140LIX9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cfap99A0A140LIX9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC23.22■■□□□ 1.31
Cfap99A0A140LIX9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Cfap99A0A140LIX9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cfap99A0A140LIX9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
Cfap99A0A140LIX9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cfap99A0A140LIX9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cfap99A0A140LIX9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cfap99A0A140LIX9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cfap99A0A140LIX9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cfap99A0A140LIX9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC23.21■■□□□ 1.31
Cfap99A0A140LIX9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cfap99A0A140LIX9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cfap99A0A140LIX9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cfap99A0A140LIX9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cfap99A0A140LIX9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.2■■□□□ 1.3
Cfap99A0A140LIX9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cfap99A0A140LIX9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Cfap99A0A140LIX9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC23.2■■□□□ 1.3
Cfap99A0A140LIX9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC23.2■■□□□ 1.3
Cfap99A0A140LIX9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Cfap99A0A140LIX9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cfap99A0A140LIX9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cfap99A0A140LIX9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Cfap99A0A140LIX9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cfap99A0A140LIX9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.19■■□□□ 1.3
Cfap99A0A140LIX9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cfap99A0A140LIX9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cfap99A0A140LIX9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
Cfap99A0A140LIX9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Cfap99A0A140LIX9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC23.19■■□□□ 1.3
Cfap99A0A140LIX9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC23.19■■□□□ 1.3
Cfap99A0A140LIX9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cfap99A0A140LIX9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cfap99A0A140LIX9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cfap99A0A140LIX9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cfap99A0A140LIX9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cfap99A0A140LIX9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cfap99A0A140LIX9 Gm27011-201ENSMUST00000182352 972 ntBASIC23.18■■□□□ 1.3
Cfap99A0A140LIX9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC23.18■■□□□ 1.3
Cfap99A0A140LIX9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cfap99A0A140LIX9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cfap99A0A140LIX9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cfap99A0A140LIX9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cfap99A0A140LIX9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Cfap99A0A140LIX9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC23.17■■□□□ 1.3
Cfap99A0A140LIX9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cfap99A0A140LIX9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cfap99A0A140LIX9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cfap99A0A140LIX9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.16■■□□□ 1.3
Cfap99A0A140LIX9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms