Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.05■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.04■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.04■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Rps24-207ENSMUST00000224568 714 ntBASIC17.03■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.02■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.02■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.02■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.01■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.99■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.99■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms