Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Gm5921-201ENSMUST00000075898 882 ntBASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav19A0A0B4J1K4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav19A0A0B4J1K4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav19A0A0B4J1K4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav19A0A0B4J1K4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav19A0A0B4J1K4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav19A0A0B4J1K4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav19A0A0B4J1K4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav19A0A0B4J1K4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav19A0A0B4J1K4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav19A0A0B4J1K4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav19A0A0B4J1K4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav19A0A0B4J1K4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav19A0A0B4J1K4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav19A0A0B4J1K4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav19A0A0B4J1K4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav19A0A0B4J1K4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav19A0A0B4J1K4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Trav19A0A0B4J1K4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav19A0A0B4J1K4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav19A0A0B4J1K4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav19A0A0B4J1K4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav19A0A0B4J1K4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav19A0A0B4J1K4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav19A0A0B4J1K4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav19A0A0B4J1K4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav19A0A0B4J1K4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav19A0A0B4J1K4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav19A0A0B4J1K4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav19A0A0B4J1K4 Gm40881-201ENSMUST00000223397 166 ntBASIC14.5□□□□□ -0.09
Trav19A0A0B4J1K4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Trav19A0A0B4J1K4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav19A0A0B4J1K4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav19A0A0B4J1K4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav19A0A0B4J1K4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav19A0A0B4J1K4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav19A0A0B4J1K4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav19A0A0B4J1K4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav19A0A0B4J1K4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav19A0A0B4J1K4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav19A0A0B4J1K4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav19A0A0B4J1K4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Trav19A0A0B4J1K4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav19A0A0B4J1K4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav19A0A0B4J1K4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav19A0A0B4J1K4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav19A0A0B4J1K4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav19A0A0B4J1K4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav19A0A0B4J1K4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav19A0A0B4J1K4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav19A0A0B4J1K4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav19A0A0B4J1K4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav19A0A0B4J1K4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav19A0A0B4J1K4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav19A0A0B4J1K4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav19A0A0B4J1K4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Gm43530-201ENSMUST00000195920 274 ntBASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms