Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.52■□□□□ 0.07
BC053393A0A0B4J1F6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
BC053393A0A0B4J1F6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
BC053393A0A0B4J1F6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
BC053393A0A0B4J1F6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
BC053393A0A0B4J1F6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Etf1-202ENSMUST00000180351 108 ntBASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
BC053393A0A0B4J1F6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
BC053393A0A0B4J1F6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
BC053393A0A0B4J1F6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BC053393A0A0B4J1F6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
BC053393A0A0B4J1F6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.5■□□□□ 0.07
BC053393A0A0B4J1F6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BC053393A0A0B4J1F6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BC053393A0A0B4J1F6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.5■□□□□ 0.07
BC053393A0A0B4J1F6 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.5■□□□□ 0.07
BC053393A0A0B4J1F6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BC053393A0A0B4J1F6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BC053393A0A0B4J1F6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
BC053393A0A0B4J1F6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BC053393A0A0B4J1F6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
BC053393A0A0B4J1F6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
BC053393A0A0B4J1F6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BC053393A0A0B4J1F6 Gm7417-201ENSMUST00000192950 473 ntBASIC15.49■□□□□ 0.07
BC053393A0A0B4J1F6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.49■□□□□ 0.07
BC053393A0A0B4J1F6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
BC053393A0A0B4J1F6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BC053393A0A0B4J1F6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BC053393A0A0B4J1F6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BC053393A0A0B4J1F6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BC053393A0A0B4J1F6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.49■□□□□ 0.07
BC053393A0A0B4J1F6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
BC053393A0A0B4J1F6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
BC053393A0A0B4J1F6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BC053393A0A0B4J1F6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.48■□□□□ 0.07
BC053393A0A0B4J1F6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BC053393A0A0B4J1F6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
BC053393A0A0B4J1F6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.48■□□□□ 0.07
BC053393A0A0B4J1F6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BC053393A0A0B4J1F6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BC053393A0A0B4J1F6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
BC053393A0A0B4J1F6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BC053393A0A0B4J1F6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
BC053393A0A0B4J1F6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.48■□□□□ 0.07
BC053393A0A0B4J1F6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
BC053393A0A0B4J1F6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BC053393A0A0B4J1F6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
BC053393A0A0B4J1F6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
BC053393A0A0B4J1F6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BC053393A0A0B4J1F6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BC053393A0A0B4J1F6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
BC053393A0A0B4J1F6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
BC053393A0A0B4J1F6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BC053393A0A0B4J1F6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
BC053393A0A0B4J1F6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BC053393A0A0B4J1F6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
BC053393A0A0B4J1F6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
BC053393A0A0B4J1F6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
BC053393A0A0B4J1F6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BC053393A0A0B4J1F6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
BC053393A0A0B4J1F6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BC053393A0A0B4J1F6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BC053393A0A0B4J1F6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
BC053393A0A0B4J1F6 Gm9959-201ENSMUST00000068277 390 ntBASIC15.46■□□□□ 0.07
BC053393A0A0B4J1F6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BC053393A0A0B4J1F6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BC053393A0A0B4J1F6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BC053393A0A0B4J1F6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BC053393A0A0B4J1F6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
BC053393A0A0B4J1F6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
BC053393A0A0B4J1F6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BC053393A0A0B4J1F6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms