Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.4■□□□□ 0.54
Sirpb1aA0A0A6YYP6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.4■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.4■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.4■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sirpb1aA0A0A6YYP6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.39■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1aA0A0A6YYP6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.38■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.36■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.36■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Gm9870-201ENSMUST00000063874 645 ntBASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Gm15820-201ENSMUST00000201566 728 ntBASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.33■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sirpb1aA0A0A6YYP6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms