Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.2■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.2■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.2■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.2■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Ighv3-4A0A0A6YXF1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.19■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Gm6420-201ENSMUST00000193885 723 ntBASIC16.19■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ighv3-4A0A0A6YXF1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.18■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ighv3-4A0A0A6YXF1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.18■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Gm13148-201ENSMUST00000118892 745 ntBASIC16.17■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Gm22240-201ENSMUST00000175225 82 ntBASIC16.17■□□□□ 0.18
Ighv3-4A0A0A6YXF1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.17■□□□□ 0.18
Ighv3-4A0A0A6YXF1 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.17■□□□□ 0.18
Ighv3-4A0A0A6YXF1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv3-4A0A0A6YXF1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
Ighv3-4A0A0A6YXF1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.17■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.16■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 AA386476-201ENSMUST00000098781 1665 ntBASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Gm8520-201ENSMUST00000186517 868 ntBASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ighv3-4A0A0A6YXF1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.14■□□□□ 0.17
Ighv3-4A0A0A6YXF1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.14■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Gm12527-201ENSMUST00000117967 564 ntBASIC16.14■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Ighv3-4A0A0A6YXF1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms