Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6n-6A0A075B6B2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6n-6A0A075B6B2 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.45□□□□□ -0.1
Trav6n-6A0A075B6B2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav6n-6A0A075B6B2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav6n-6A0A075B6B2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-6A0A075B6B2 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.44□□□□□ -0.1
Trav6n-6A0A075B6B2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-6A0A075B6B2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-6A0A075B6B2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-6A0A075B6B2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-6A0A075B6B2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-6A0A075B6B2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-6A0A075B6B2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-6A0A075B6B2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-6A0A075B6B2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-6A0A075B6B2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav6n-6A0A075B6B2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-6A0A075B6B2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav6n-6A0A075B6B2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav6n-6A0A075B6B2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-6A0A075B6B2 Gm9959-201ENSMUST00000068277 390 ntBASIC14.43□□□□□ -0.1
Trav6n-6A0A075B6B2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-6A0A075B6B2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-6A0A075B6B2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav6n-6A0A075B6B2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-6A0A075B6B2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-6A0A075B6B2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-6A0A075B6B2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav6n-6A0A075B6B2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-6A0A075B6B2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-6A0A075B6B2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-6A0A075B6B2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav6n-6A0A075B6B2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trav6n-6A0A075B6B2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-6A0A075B6B2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav6n-6A0A075B6B2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav6n-6A0A075B6B2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-6A0A075B6B2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-6A0A075B6B2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-6A0A075B6B2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-6A0A075B6B2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-6A0A075B6B2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav6n-6A0A075B6B2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav6n-6A0A075B6B2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Trav6n-6A0A075B6B2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav6n-6A0A075B6B2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6n-6A0A075B6B2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Trav6n-6A0A075B6B2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6n-6A0A075B6B2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6n-6A0A075B6B2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6n-6A0A075B6B2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav6n-6A0A075B6B2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6n-6A0A075B6B2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6n-6A0A075B6B2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6n-6A0A075B6B2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav6n-6A0A075B6B2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6n-6A0A075B6B2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav6n-6A0A075B6B2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-6A0A075B6B2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-6A0A075B6B2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-6A0A075B6B2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav6n-6A0A075B6B2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-6A0A075B6B2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-6A0A075B6B2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav6n-6A0A075B6B2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-6A0A075B6B2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.4□□□□□ -0.1
Trav6n-6A0A075B6B2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-6A0A075B6B2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-6A0A075B6B2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Trav6n-6A0A075B6B2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.4□□□□□ -0.1
Trav6n-6A0A075B6B2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-6A0A075B6B2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trav6n-6A0A075B6B2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-6A0A075B6B2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Gm14117-201ENSMUST00000122417 843 ntBASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav6n-6A0A075B6B2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms