Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-4A0A075B652 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-4A0A075B652 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-4A0A075B652 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trav5-4A0A075B652 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-4A0A075B652 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav5-4A0A075B652 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-4A0A075B652 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-4A0A075B652 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Trav5-4A0A075B652 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.16■□□□□ 0.18
Trav5-4A0A075B652 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav5-4A0A075B652 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-4A0A075B652 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-4A0A075B652 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-4A0A075B652 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.15■□□□□ 0.18
Trav5-4A0A075B652 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-4A0A075B652 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-4A0A075B652 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-4A0A075B652 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-4A0A075B652 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav5-4A0A075B652 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trav5-4A0A075B652 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav5-4A0A075B652 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav5-4A0A075B652 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.14■□□□□ 0.17
Trav5-4A0A075B652 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav5-4A0A075B652 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.14■□□□□ 0.17
Trav5-4A0A075B652 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.14■□□□□ 0.17
Trav5-4A0A075B652 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Trav5-4A0A075B652 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav5-4A0A075B652 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-4A0A075B652 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-4A0A075B652 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-4A0A075B652 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-4A0A075B652 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav5-4A0A075B652 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
Trav5-4A0A075B652 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-4A0A075B652 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-4A0A075B652 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-4A0A075B652 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav5-4A0A075B652 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-4A0A075B652 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-4A0A075B652 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-4A0A075B652 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-4A0A075B652 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Trav5-4A0A075B652 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav5-4A0A075B652 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-4A0A075B652 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-4A0A075B652 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-4A0A075B652 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav5-4A0A075B652 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-4A0A075B652 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-4A0A075B652 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-4A0A075B652 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav5-4A0A075B652 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav5-4A0A075B652 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav5-4A0A075B652 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.11■□□□□ 0.17
Trav5-4A0A075B652 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav5-4A0A075B652 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav5-4A0A075B652 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav5-4A0A075B652 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav5-4A0A075B652 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-4A0A075B652 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-4A0A075B652 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-4A0A075B652 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav5-4A0A075B652 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms