Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-7-dv9A0A075B639 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-7-dv9A0A075B639 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-7-dv9A0A075B639 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-7-dv9A0A075B639 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-7-dv9A0A075B639 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-7-dv9A0A075B639 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.23■□□□□ 0.35
Trav6-7-dv9A0A075B639 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav6-7-dv9A0A075B639 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-7-dv9A0A075B639 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-7-dv9A0A075B639 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-7-dv9A0A075B639 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-7-dv9A0A075B639 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-7-dv9A0A075B639 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-7-dv9A0A075B639 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-7-dv9A0A075B639 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trav6-7-dv9A0A075B639 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-7-dv9A0A075B639 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-7-dv9A0A075B639 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-7-dv9A0A075B639 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-7-dv9A0A075B639 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.22■□□□□ 0.35
Trav6-7-dv9A0A075B639 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-7-dv9A0A075B639 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav6-7-dv9A0A075B639 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-7-dv9A0A075B639 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-7-dv9A0A075B639 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-7-dv9A0A075B639 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-7-dv9A0A075B639 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-7-dv9A0A075B639 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-7-dv9A0A075B639 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.21■□□□□ 0.35
Trav6-7-dv9A0A075B639 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-7-dv9A0A075B639 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-7-dv9A0A075B639 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-7-dv9A0A075B639 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-7-dv9A0A075B639 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.21■□□□□ 0.34
Trav6-7-dv9A0A075B639 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trav6-7-dv9A0A075B639 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6-7-dv9A0A075B639 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6-7-dv9A0A075B639 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6-7-dv9A0A075B639 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.2■□□□□ 0.34
Trav6-7-dv9A0A075B639 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6-7-dv9A0A075B639 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6-7-dv9A0A075B639 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6-7-dv9A0A075B639 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trav6-7-dv9A0A075B639 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6-7-dv9A0A075B639 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Trav6-7-dv9A0A075B639 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6-7-dv9A0A075B639 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Trav6-7-dv9A0A075B639 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6-7-dv9A0A075B639 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6-7-dv9A0A075B639 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav6-7-dv9A0A075B639 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6-7-dv9A0A075B639 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6-7-dv9A0A075B639 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6-7-dv9A0A075B639 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6-7-dv9A0A075B639 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6-7-dv9A0A075B639 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6-7-dv9A0A075B639 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-7-dv9A0A075B639 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav6-7-dv9A0A075B639 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.18■□□□□ 0.34
Trav6-7-dv9A0A075B639 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.18■□□□□ 0.34
Trav6-7-dv9A0A075B639 Gm13241-201ENSMUST00000094493 780 ntBASIC17.18■□□□□ 0.34
Trav6-7-dv9A0A075B639 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-7-dv9A0A075B639 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav6-7-dv9A0A075B639 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trav6-7-dv9A0A075B639 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-7-dv9A0A075B639 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.18■□□□□ 0.34
Trav6-7-dv9A0A075B639 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-7-dv9A0A075B639 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav6-7-dv9A0A075B639 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-7-dv9A0A075B639 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-7-dv9A0A075B639 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-7-dv9A0A075B639 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-7-dv9A0A075B639 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-7-dv9A0A075B639 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav6-7-dv9A0A075B639 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-7-dv9A0A075B639 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-7-dv9A0A075B639 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-7-dv9A0A075B639 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-7-dv9A0A075B639 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-7-dv9A0A075B639 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.16■□□□□ 0.34
Trav6-7-dv9A0A075B639 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.16■□□□□ 0.34
Trav6-7-dv9A0A075B639 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.16■□□□□ 0.34
Trav6-7-dv9A0A075B639 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-7-dv9A0A075B639 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.16■□□□□ 0.34
Trav6-7-dv9A0A075B639 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav6-7-dv9A0A075B639 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-7-dv9A0A075B639 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-7-dv9A0A075B639 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-7-dv9A0A075B639 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-7-dv9A0A075B639 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-7-dv9A0A075B639 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.16■□□□□ 0.34
Trav6-7-dv9A0A075B639 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-7-dv9A0A075B639 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-7-dv9A0A075B639 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-7-dv9A0A075B639 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav6-7-dv9A0A075B639 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav6-7-dv9A0A075B639 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Trav6-7-dv9A0A075B639 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-7-dv9A0A075B639 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms