Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-2A0A075B638 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-2A0A075B638 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-2A0A075B638 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-2A0A075B638 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.39■□□□□ 0.05
Trav4-2A0A075B638 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav4-2A0A075B638 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-2A0A075B638 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-2A0A075B638 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-2A0A075B638 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav4-2A0A075B638 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-2A0A075B638 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-2A0A075B638 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.37■□□□□ 0.05
Trav4-2A0A075B638 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-2A0A075B638 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav4-2A0A075B638 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-2A0A075B638 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav4-2A0A075B638 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Trav4-2A0A075B638 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-2A0A075B638 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-2A0A075B638 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-2A0A075B638 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-2A0A075B638 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav4-2A0A075B638 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav4-2A0A075B638 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav4-2A0A075B638 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-2A0A075B638 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav4-2A0A075B638 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.35■□□□□ 0.05
Trav4-2A0A075B638 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-2A0A075B638 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-2A0A075B638 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-2A0A075B638 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-2A0A075B638 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-2A0A075B638 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav4-2A0A075B638 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav4-2A0A075B638 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav4-2A0A075B638 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-2A0A075B638 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav4-2A0A075B638 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav4-2A0A075B638 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Trav4-2A0A075B638 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav4-2A0A075B638 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-2A0A075B638 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-2A0A075B638 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-2A0A075B638 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-2A0A075B638 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav4-2A0A075B638 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-2A0A075B638 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-2A0A075B638 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-2A0A075B638 Grk6-206ENSMUST00000224995 2971 ntBASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms