Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.25□□□□□ -0.29
Trav4d-3A0A075B625 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4d-3A0A075B625 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4d-3A0A075B625 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav4d-3A0A075B625 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4d-3A0A075B625 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4d-3A0A075B625 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4d-3A0A075B625 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4d-3A0A075B625 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4d-3A0A075B625 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav4d-3A0A075B625 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4d-3A0A075B625 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav4d-3A0A075B625 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav4d-3A0A075B625 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4d-3A0A075B625 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4d-3A0A075B625 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4d-3A0A075B625 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4d-3A0A075B625 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4d-3A0A075B625 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4d-3A0A075B625 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.21□□□□□ -0.29
Trav4d-3A0A075B625 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4d-3A0A075B625 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4d-3A0A075B625 BC021767-201ENSMUST00000126387 1716 ntBASIC13.21□□□□□ -0.3
Trav4d-3A0A075B625 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.21□□□□□ -0.3
Trav4d-3A0A075B625 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4d-3A0A075B625 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trav4d-3A0A075B625 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.21□□□□□ -0.3
Trav4d-3A0A075B625 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trav4d-3A0A075B625 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4d-3A0A075B625 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
Trav4d-3A0A075B625 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4d-3A0A075B625 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4d-3A0A075B625 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav4d-3A0A075B625 Grk6-206ENSMUST00000224995 2971 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms