Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7n-4A0A075B620 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7n-4A0A075B620 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trav7n-4A0A075B620 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Trav7n-4A0A075B620 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7n-4A0A075B620 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7n-4A0A075B620 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav7n-4A0A075B620 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7n-4A0A075B620 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.73□□□□□ -0.05
Trav7n-4A0A075B620 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7n-4A0A075B620 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav7n-4A0A075B620 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7n-4A0A075B620 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7n-4A0A075B620 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7n-4A0A075B620 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7n-4A0A075B620 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.73□□□□□ -0.05
Trav7n-4A0A075B620 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7n-4A0A075B620 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7n-4A0A075B620 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7n-4A0A075B620 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7n-4A0A075B620 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7n-4A0A075B620 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 BC021767-201ENSMUST00000126387 1716 ntBASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7n-4A0A075B620 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav7n-4A0A075B620 Gm28536-201ENSMUST00000190971 1317 ntBASIC14.71□□□□□ -0.05
Trav7n-4A0A075B620 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav7n-4A0A075B620 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7n-4A0A075B620 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7n-4A0A075B620 Gm11687-201ENSMUST00000118911 886 ntBASIC14.71□□□□□ -0.05
Trav7n-4A0A075B620 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav7n-4A0A075B620 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav7n-4A0A075B620 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7n-4A0A075B620 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav7n-4A0A075B620 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7n-4A0A075B620 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7n-4A0A075B620 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7n-4A0A075B620 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7n-4A0A075B620 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.71□□□□□ -0.06
Trav7n-4A0A075B620 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav7n-4A0A075B620 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav7n-4A0A075B620 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav7n-4A0A075B620 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Trav7n-4A0A075B620 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7n-4A0A075B620 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7n-4A0A075B620 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
Trav7n-4A0A075B620 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav7n-4A0A075B620 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7n-4A0A075B620 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7n-4A0A075B620 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav7n-4A0A075B620 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav7n-4A0A075B620 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7n-4A0A075B620 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7n-4A0A075B620 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7n-4A0A075B620 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7n-4A0A075B620 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7n-4A0A075B620 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7n-4A0A075B620 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trav7n-4A0A075B620 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav7n-4A0A075B620 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7n-4A0A075B620 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7n-4A0A075B620 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7n-4A0A075B620 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7n-4A0A075B620 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trav7n-4A0A075B620 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7n-4A0A075B620 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.69□□□□□ -0.06
Trav7n-4A0A075B620 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7n-4A0A075B620 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7n-4A0A075B620 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7n-4A0A075B620 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7n-4A0A075B620 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav7n-4A0A075B620 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7n-4A0A075B620 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7n-4A0A075B620 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7n-4A0A075B620 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7n-4A0A075B620 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7n-4A0A075B620 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7n-4A0A075B620 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav7n-4A0A075B620 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav7n-4A0A075B620 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms