Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-1A0A075B606 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-1A0A075B606 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-1A0A075B606 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav13d-1A0A075B606 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav13d-1A0A075B606 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-1A0A075B606 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav13d-1A0A075B606 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-1A0A075B606 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-1A0A075B606 Gm5874-201ENSMUST00000096101 508 ntBASIC14.21□□□□□ -0.13
Trav13d-1A0A075B606 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav13d-1A0A075B606 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13d-1A0A075B606 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trav13d-1A0A075B606 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13d-1A0A075B606 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-1A0A075B606 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-1A0A075B606 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-1A0A075B606 Smad6-203ENSMUST00000179458 273 ntBASIC14.2□□□□□ -0.14
Trav13d-1A0A075B606 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-1A0A075B606 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-1A0A075B606 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-1A0A075B606 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.19□□□□□ -0.14
Trav13d-1A0A075B606 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-1A0A075B606 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-1A0A075B606 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav13d-1A0A075B606 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-1A0A075B606 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-1A0A075B606 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-1A0A075B606 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-1A0A075B606 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-1A0A075B606 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav13d-1A0A075B606 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav13d-1A0A075B606 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-1A0A075B606 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-1A0A075B606 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-1A0A075B606 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.17□□□□□ -0.14
Trav13d-1A0A075B606 Gm11421-201ENSMUST00000122124 294 ntBASIC14.17□□□□□ -0.14
Trav13d-1A0A075B606 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-1A0A075B606 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-1A0A075B606 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-1A0A075B606 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-1A0A075B606 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav13d-1A0A075B606 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-1A0A075B606 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-1A0A075B606 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-1A0A075B606 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms