Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trav5-1A0A075B5Z7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav5-1A0A075B5Z7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav5-1A0A075B5Z7 Gm42642-201ENSMUST00000200683 355 ntBASIC16.74■□□□□ 0.27
Trav5-1A0A075B5Z7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav5-1A0A075B5Z7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav5-1A0A075B5Z7 Gm9988-201ENSMUST00000069786 435 ntBASIC16.74■□□□□ 0.27
Trav5-1A0A075B5Z7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav5-1A0A075B5Z7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav5-1A0A075B5Z7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav5-1A0A075B5Z7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav5-1A0A075B5Z7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav5-1A0A075B5Z7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav5-1A0A075B5Z7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav5-1A0A075B5Z7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav5-1A0A075B5Z7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trav5-1A0A075B5Z7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav5-1A0A075B5Z7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav5-1A0A075B5Z7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.73■□□□□ 0.27
Trav5-1A0A075B5Z7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav5-1A0A075B5Z7 Gm18671-201ENSMUST00000214826 683 ntBASIC16.73■□□□□ 0.27
Trav5-1A0A075B5Z7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav5-1A0A075B5Z7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav5-1A0A075B5Z7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav5-1A0A075B5Z7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav5-1A0A075B5Z7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Trav5-1A0A075B5Z7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav5-1A0A075B5Z7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.72■□□□□ 0.27
Trav5-1A0A075B5Z7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-1A0A075B5Z7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-1A0A075B5Z7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-1A0A075B5Z7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav5-1A0A075B5Z7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-1A0A075B5Z7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.72■□□□□ 0.27
Trav5-1A0A075B5Z7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav5-1A0A075B5Z7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-1A0A075B5Z7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-1A0A075B5Z7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-1A0A075B5Z7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-1A0A075B5Z7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-1A0A075B5Z7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-1A0A075B5Z7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-1A0A075B5Z7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-1A0A075B5Z7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-1A0A075B5Z7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trav5-1A0A075B5Z7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav5-1A0A075B5Z7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav5-1A0A075B5Z7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.71■□□□□ 0.27
Trav5-1A0A075B5Z7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav5-1A0A075B5Z7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav5-1A0A075B5Z7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav5-1A0A075B5Z7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav5-1A0A075B5Z7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav5-1A0A075B5Z7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav5-1A0A075B5Z7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trav5-1A0A075B5Z7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-1A0A075B5Z7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-1A0A075B5Z7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-1A0A075B5Z7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-1A0A075B5Z7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.7■□□□□ 0.26
Trav5-1A0A075B5Z7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-1A0A075B5Z7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-1A0A075B5Z7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-1A0A075B5Z7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-1A0A075B5Z7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-1A0A075B5Z7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav5-1A0A075B5Z7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav5-1A0A075B5Z7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.69■□□□□ 0.26
Trav5-1A0A075B5Z7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Trav5-1A0A075B5Z7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav5-1A0A075B5Z7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav5-1A0A075B5Z7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav5-1A0A075B5Z7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav5-1A0A075B5Z7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Trav5-1A0A075B5Z7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav5-1A0A075B5Z7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5-1A0A075B5Z7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Trav5-1A0A075B5Z7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5-1A0A075B5Z7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5-1A0A075B5Z7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav5-1A0A075B5Z7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
Trav5-1A0A075B5Z7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5-1A0A075B5Z7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5-1A0A075B5Z7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trav5-1A0A075B5Z7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5-1A0A075B5Z7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5-1A0A075B5Z7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav5-1A0A075B5Z7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.67■□□□□ 0.26
Trav5-1A0A075B5Z7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5-1A0A075B5Z7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav5-1A0A075B5Z7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5-1A0A075B5Z7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5-1A0A075B5Z7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trav5-1A0A075B5Z7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5-1A0A075B5Z7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5-1A0A075B5Z7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5-1A0A075B5Z7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav5-1A0A075B5Z7 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.67■□□□□ 0.26
Trav5-1A0A075B5Z7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav5-1A0A075B5Z7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms