Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Ugt1a9-201ENSMUST00000073772 2190 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Ikbkg-203ENSMUST00000114127 3332 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm20518-201ENSMUST00000150068 3811 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Hmgb3O54879 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Apol11b-204ENSMUST00000181467 1933 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm43847-201ENSMUST00000200070 1940 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Pde4b-201ENSMUST00000030251 1923 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm44067-201ENSMUST00000203350 2971 ntTSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Scml2-204ENSMUST00000087090 2953 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Mapre2-201ENSMUST00000025127 4026 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Polr1b-202ENSMUST00000103205 3998 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 2900011O08Rik-201ENSMUST00000056521 2394 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Chat-201ENSMUST00000070125 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Prune2-202ENSMUST00000223920 1803 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Dhx30-204ENSMUST00000196171 3885 ntTSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm12947-201ENSMUST00000116114 420 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm14807-201ENSMUST00000116640 983 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm11218-201ENSMUST00000121364 1214 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm16145-201ENSMUST00000128807 583 ntTSL 2 BASIC7.88□□□□□ -1.15
Hmgb3O54879 B9d1os-201ENSMUST00000137010 674 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm8379-201ENSMUST00000165448 1192 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm2907-201ENSMUST00000181256 1192 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm9578-201ENSMUST00000182354 753 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm3534-201ENSMUST00000182522 1001 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm27813-201ENSMUST00000184343 354 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 1700108F19Rik-204ENSMUST00000189375 494 ntTSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm37559-201ENSMUST00000193556 832 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm43378-201ENSMUST00000199336 582 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm3726-201ENSMUST00000203110 785 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm6352-201ENSMUST00000203583 1134 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm8959-201ENSMUST00000213150 571 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC7.88□□□□□ -1.15
Hmgb3O54879 AC102847.1-202ENSMUST00000226313 1245 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 AC154766.1-201ENSMUST00000226550 936 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Tmem89-201ENSMUST00000026744 538 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Mirlet7i-201ENSMUST00000083472 85 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Rpgr-205ENSMUST00000115533 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Ccdc80-201ENSMUST00000061050 3648 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Habp2-206ENSMUST00000166049 1650 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm4798-201ENSMUST00000218024 1699 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Arhgef3-201ENSMUST00000049206 3585 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Stra6-214ENSMUST00000170397 3077 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 4732419C18Rik-201ENSMUST00000181805 3536 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Zfp607a-201ENSMUST00000053722 2061 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm44531-201ENSMUST00000208364 2000 ntBASIC7.88□□□□□ -1.15
Hmgb3O54879 Wdr20rt-202ENSMUST00000221658 1570 ntTSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Mical3-201ENSMUST00000077159 2875 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Aasdh-202ENSMUST00000120963 3694 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Hmgb3O54879 Hmgcs1-201ENSMUST00000179869 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Hdlbp-201ENSMUST00000042498 4427 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Hmgb3O54879 Rap1gds1-205ENSMUST00000196280 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Hmgb3O54879 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Hmgb3O54879 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC7.87□□□□□ -1.15
Hmgb3O54879 Zfp354b-203ENSMUST00000164280 1806 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Hmgb3O54879 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Hmgb3O54879 Arhgef9-207ENSMUST00000113885 4578 ntTSL 5 BASIC7.87□□□□□ -1.15
Hmgb3O54879 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Hmgb3O54879 Acox3-201ENSMUST00000068563 3386 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Hmgb3O54879 Rab3gap1-207ENSMUST00000212506 2967 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Hmgb3O54879 Ccnt1-201ENSMUST00000012104 2175 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Hmgb3O54879 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Hmgb3O54879 Gm12716-201ENSMUST00000120606 1354 ntBASIC7.87□□□□□ -1.15
Hmgb3O54879 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC7.87□□□□□ -1.15
Hmgb3O54879 Mpp1-201ENSMUST00000033775 2525 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Hmgb3O54879 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Hmgb3O54879 Gm43499-201ENSMUST00000202091 2107 ntBASIC7.87□□□□□ -1.15
Hmgb3O54879 Thpo-202ENSMUST00000115437 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Hmgb3O54879 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Hmgb3O54879 Gm6682-201ENSMUST00000169666 1346 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 135.3 ms