Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Hmgb3O54879 Max-205ENSMUST00000218640 752 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 CT010505.2-201ENSMUST00000227918 998 ntBASIC7.95□□□□□ -1.14
Hmgb3O54879 Melk-201ENSMUST00000045607 2955 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Snora73b-201ENSMUST00000083419 205 ntBASIC7.95□□□□□ -1.14
Hmgb3O54879 Rpl27-ps1-201ENSMUST00000088784 408 ntBASIC7.95□□□□□ -1.14
Hmgb3O54879 Grxcr2-201ENSMUST00000097591 1120 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Tfdp1-203ENSMUST00000209396 2421 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 9630001P10Rik-202ENSMUST00000181335 3006 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Tmem63c-202ENSMUST00000131878 3311 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Hmgb3O54879 Actr2-201ENSMUST00000000137 3631 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Gm36638-202ENSMUST00000192073 2169 ntBASIC7.95□□□□□ -1.14
Hmgb3O54879 Rtkn2-204ENSMUST00000118160 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Hmgb3O54879 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Hmgb3O54879 Gm26638-201ENSMUST00000181762 1924 ntTSL 5 BASIC7.95□□□□□ -1.14
Hmgb3O54879 Ttc41-205ENSMUST00000219108 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Clstn3-202ENSMUST00000112523 3703 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Olfr601-202ENSMUST00000210431 2266 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
Hmgb3O54879 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
Hmgb3O54879 Gpr83-201ENSMUST00000034408 3586 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Gpkow-201ENSMUST00000049896 3579 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Kdelc1-202ENSMUST00000065767 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Thrap3-203ENSMUST00000106142 2744 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Rtl5-201ENSMUST00000113631 4653 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Pfkfb2-213ENSMUST00000191347 1759 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Zfp84-201ENSMUST00000032802 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Gucy2d-201ENSMUST00000098274 3537 ntTSL 5 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Utp14a-201ENSMUST00000080713 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Sfi1-201ENSMUST00000066391 3898 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Pfkfb2-210ENSMUST00000189167 1558 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Lin7a-202ENSMUST00000105280 1634 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 D330050G23Rik-202ENSMUST00000128305 1616 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Gm4877-201ENSMUST00000104977 798 ntBASIC7.94□□□□□ -1.14
Hmgb3O54879 Gm15320-201ENSMUST00000118085 364 ntBASIC7.94□□□□□ -1.14
Hmgb3O54879 Gm13857-201ENSMUST00000139645 173 ntBASIC7.94□□□□□ -1.14
Hmgb3O54879 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Gm20394-201ENSMUST00000173304 942 ntTSL 5 BASIC7.94□□□□□ -1.14
Hmgb3O54879 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Mir6407-201ENSMUST00000184510 101 ntBASIC7.94□□□□□ -1.14
Hmgb3O54879 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Gm37365-201ENSMUST00000193109 409 ntBASIC7.94□□□□□ -1.14
Hmgb3O54879 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Gm44498-201ENSMUST00000199509 111 ntBASIC7.94□□□□□ -1.14
Hmgb3O54879 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC7.94□□□□□ -1.14
Hmgb3O54879 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 AC155300.1-201ENSMUST00000219134 480 ntBASIC7.94□□□□□ -1.14
Hmgb3O54879 Gm8557-201ENSMUST00000220777 475 ntBASIC7.94□□□□□ -1.14
Hmgb3O54879 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Olfr434-201ENSMUST00000076752 1056 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Vmn1r223-201ENSMUST00000091719 1086 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Zfp408-201ENSMUST00000099714 3469 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Hmgb3O54879 6030443J06Rik-203ENSMUST00000181764 4299 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Gm19127-201ENSMUST00000207067 2445 ntBASIC7.94□□□□□ -1.14
Hmgb3O54879 Nol11-201ENSMUST00000018577 3158 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Siglech-201ENSMUST00000060416 2138 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Myo15b-207ENSMUST00000167507 1785 ntTSL 5 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Cep63-211ENSMUST00000216281 1791 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Scgn-201ENSMUST00000021770 1412 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Adra2b-201ENSMUST00000071902 3936 ntAPPRIS P2 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Top3a-202ENSMUST00000102668 3542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Prr30-201ENSMUST00000057718 1862 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
Hmgb3O54879 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Msl3-202ENSMUST00000112137 2316 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Nde1-202ENSMUST00000115795 2335 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Thbs3-201ENSMUST00000029682 3190 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb3O54879 Gm44848-201ENSMUST00000207808 3234 ntBASIC7.93□□□□□ -1.14
Hmgb3O54879 Trim43a-201ENSMUST00000164661 1981 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Tmem181b-ps-202ENSMUST00000180035 2426 ntTSL 5 BASIC7.93□□□□□ -1.14
Hmgb3O54879 Trappc9-201ENSMUST00000023276 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Hmgb3O54879 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Iqcg-202ENSMUST00000115100 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Zswim2-201ENSMUST00000038223 2062 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Aldh18a1-201ENSMUST00000025979 3527 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmgb3O54879 Ywhae-201ENSMUST00000067664 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms