Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Speer3W4VSP1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Speer3W4VSP1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Speer3W4VSP1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Speer3W4VSP1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Speer3W4VSP1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Speer3W4VSP1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Speer3W4VSP1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.77■□□□□ 0.76
Speer3W4VSP1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Speer3W4VSP1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Speer3W4VSP1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Speer3W4VSP1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Speer3W4VSP1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Speer3W4VSP1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.76■□□□□ 0.75
Speer3W4VSP1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Speer3W4VSP1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Speer3W4VSP1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Speer3W4VSP1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Speer3W4VSP1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Speer3W4VSP1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Speer3W4VSP1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Speer3W4VSP1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Speer3W4VSP1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Speer3W4VSP1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
Speer3W4VSP1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.75■□□□□ 0.75
Speer3W4VSP1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Speer3W4VSP1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Speer3W4VSP1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Speer3W4VSP1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Speer3W4VSP1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.75■□□□□ 0.75
Speer3W4VSP1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Speer3W4VSP1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Speer3W4VSP1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.74■□□□□ 0.75
Speer3W4VSP1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Speer3W4VSP1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Speer3W4VSP1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Speer3W4VSP1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Speer3W4VSP1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Speer3W4VSP1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.74■□□□□ 0.75
Speer3W4VSP1 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.74■□□□□ 0.75
Speer3W4VSP1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.74■□□□□ 0.75
Speer3W4VSP1 Gm7143-201ENSMUST00000222811 859 ntBASIC19.74■□□□□ 0.75
Speer3W4VSP1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Speer3W4VSP1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Speer3W4VSP1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Speer3W4VSP1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Speer3W4VSP1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Speer3W4VSP1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Speer3W4VSP1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Speer3W4VSP1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Speer3W4VSP1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Speer3W4VSP1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Speer3W4VSP1 Gm22238-201ENSMUST00000175222 88 ntBASIC19.72■□□□□ 0.75
Speer3W4VSP1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Speer3W4VSP1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Speer3W4VSP1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Speer3W4VSP1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Speer3W4VSP1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Speer3W4VSP1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Speer3W4VSP1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Speer3W4VSP1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Speer3W4VSP1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Speer3W4VSP1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Speer3W4VSP1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Speer3W4VSP1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Speer3W4VSP1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Speer3W4VSP1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Speer3W4VSP1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Speer3W4VSP1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Speer3W4VSP1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Speer3W4VSP1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Speer3W4VSP1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Speer3W4VSP1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.7■□□□□ 0.74
Speer3W4VSP1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Speer3W4VSP1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.7■□□□□ 0.74
Speer3W4VSP1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Speer3W4VSP1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Speer3W4VSP1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Speer3W4VSP1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Speer3W4VSP1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Speer3W4VSP1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Speer3W4VSP1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Speer3W4VSP1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Speer3W4VSP1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Speer3W4VSP1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Speer3W4VSP1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Speer3W4VSP1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Speer3W4VSP1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Speer3W4VSP1 Gm9870-201ENSMUST00000063874 645 ntBASIC19.69■□□□□ 0.74
Speer3W4VSP1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Speer3W4VSP1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Speer3W4VSP1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Speer3W4VSP1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer3W4VSP1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Speer3W4VSP1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
Speer3W4VSP1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer3W4VSP1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Speer3W4VSP1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Speer3W4VSP1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.68■□□□□ 0.74
Speer3W4VSP1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms