Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upk1bQ9Z2C6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upk1bQ9Z2C6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upk1bQ9Z2C6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Upk1bQ9Z2C6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upk1bQ9Z2C6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upk1bQ9Z2C6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Upk1bQ9Z2C6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Upk1bQ9Z2C6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.1■□□□□ 0.49
Upk1bQ9Z2C6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upk1bQ9Z2C6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upk1bQ9Z2C6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Upk1bQ9Z2C6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upk1bQ9Z2C6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Upk1bQ9Z2C6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.09■□□□□ 0.49
Upk1bQ9Z2C6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1bQ9Z2C6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.09■□□□□ 0.49
Upk1bQ9Z2C6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1bQ9Z2C6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1bQ9Z2C6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1bQ9Z2C6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1bQ9Z2C6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Upk1bQ9Z2C6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1bQ9Z2C6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1bQ9Z2C6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1bQ9Z2C6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1bQ9Z2C6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1bQ9Z2C6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1bQ9Z2C6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1bQ9Z2C6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.08■□□□□ 0.49
Upk1bQ9Z2C6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Upk1bQ9Z2C6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
Upk1bQ9Z2C6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Upk1bQ9Z2C6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Upk1bQ9Z2C6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.08■□□□□ 0.48
Upk1bQ9Z2C6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upk1bQ9Z2C6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upk1bQ9Z2C6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Upk1bQ9Z2C6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Upk1bQ9Z2C6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upk1bQ9Z2C6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upk1bQ9Z2C6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Upk1bQ9Z2C6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1bQ9Z2C6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1bQ9Z2C6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1bQ9Z2C6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1bQ9Z2C6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1bQ9Z2C6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1bQ9Z2C6 Gm13238-201ENSMUST00000117655 780 ntBASIC18.07■□□□□ 0.48
Upk1bQ9Z2C6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.07■□□□□ 0.48
Upk1bQ9Z2C6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1bQ9Z2C6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1bQ9Z2C6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1bQ9Z2C6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1bQ9Z2C6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1bQ9Z2C6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Upk1bQ9Z2C6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.06■□□□□ 0.48
Upk1bQ9Z2C6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Upk1bQ9Z2C6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Upk1bQ9Z2C6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upk1bQ9Z2C6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upk1bQ9Z2C6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.06■□□□□ 0.48
Upk1bQ9Z2C6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.06■□□□□ 0.48
Upk1bQ9Z2C6 Gm43566-201ENSMUST00000196851 808 ntBASIC18.06■□□□□ 0.48
Upk1bQ9Z2C6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upk1bQ9Z2C6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.06■□□□□ 0.48
Upk1bQ9Z2C6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upk1bQ9Z2C6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Upk1bQ9Z2C6 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.06■□□□□ 0.48
Upk1bQ9Z2C6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upk1bQ9Z2C6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
Upk1bQ9Z2C6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Upk1bQ9Z2C6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.05■□□□□ 0.48
Upk1bQ9Z2C6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Upk1bQ9Z2C6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Upk1bQ9Z2C6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.05■□□□□ 0.48
Upk1bQ9Z2C6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Upk1bQ9Z2C6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.05■□□□□ 0.48
Upk1bQ9Z2C6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Upk1bQ9Z2C6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Upk1bQ9Z2C6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Upk1bQ9Z2C6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1bQ9Z2C6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1bQ9Z2C6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1bQ9Z2C6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1bQ9Z2C6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1bQ9Z2C6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1bQ9Z2C6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Upk1bQ9Z2C6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1bQ9Z2C6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Upk1bQ9Z2C6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Upk1bQ9Z2C6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1bQ9Z2C6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1bQ9Z2C6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Upk1bQ9Z2C6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.04■□□□□ 0.48
Upk1bQ9Z2C6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk1bQ9Z2C6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk1bQ9Z2C6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Upk1bQ9Z2C6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk1bQ9Z2C6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms