Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cldn3Q9Z0G9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Cldn3Q9Z0G9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn3Q9Z0G9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn3Q9Z0G9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn3Q9Z0G9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn3Q9Z0G9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.76■□□□□ 0.75
Cldn3Q9Z0G9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cldn3Q9Z0G9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn3Q9Z0G9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn3Q9Z0G9 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.76■□□□□ 0.75
Cldn3Q9Z0G9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn3Q9Z0G9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn3Q9Z0G9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn3Q9Z0G9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.76■□□□□ 0.75
Cldn3Q9Z0G9 Golph3-202ENSMUST00000226517 2359 ntBASIC19.76■□□□□ 0.75
Cldn3Q9Z0G9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn3Q9Z0G9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cldn3Q9Z0G9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Cldn3Q9Z0G9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cldn3Q9Z0G9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn3Q9Z0G9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn3Q9Z0G9 Gm12251-201ENSMUST00000117893 792 ntBASIC19.75■□□□□ 0.75
Cldn3Q9Z0G9 Gm8493-201ENSMUST00000196881 489 ntBASIC19.75■□□□□ 0.75
Cldn3Q9Z0G9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.75■□□□□ 0.75
Cldn3Q9Z0G9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn3Q9Z0G9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn3Q9Z0G9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn3Q9Z0G9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn3Q9Z0G9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn3Q9Z0G9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn3Q9Z0G9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn3Q9Z0G9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn3Q9Z0G9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn3Q9Z0G9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.74■□□□□ 0.75
Cldn3Q9Z0G9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn3Q9Z0G9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn3Q9Z0G9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cldn3Q9Z0G9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.74■□□□□ 0.75
Cldn3Q9Z0G9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn3Q9Z0G9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn3Q9Z0G9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Cldn3Q9Z0G9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn3Q9Z0G9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn3Q9Z0G9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn3Q9Z0G9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn3Q9Z0G9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn3Q9Z0G9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn3Q9Z0G9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn3Q9Z0G9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.73■□□□□ 0.75
Cldn3Q9Z0G9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cldn3Q9Z0G9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.73■□□□□ 0.75
Cldn3Q9Z0G9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cldn3Q9Z0G9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cldn3Q9Z0G9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Cldn3Q9Z0G9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Iqck-206ENSMUST00000208658 2891 ntBASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn3Q9Z0G9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn3Q9Z0G9 AA386476-201ENSMUST00000098781 1665 ntBASIC19.71■□□□□ 0.75
Cldn3Q9Z0G9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cldn3Q9Z0G9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn3Q9Z0G9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.71■□□□□ 0.75
Cldn3Q9Z0G9 Gm6139-201ENSMUST00000079261 882 ntBASIC19.71■□□□□ 0.75
Cldn3Q9Z0G9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn3Q9Z0G9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn3Q9Z0G9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn3Q9Z0G9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn3Q9Z0G9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.7■□□□□ 0.74
Cldn3Q9Z0G9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn3Q9Z0G9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn3Q9Z0G9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn3Q9Z0G9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn3Q9Z0G9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.7■□□□□ 0.74
Cldn3Q9Z0G9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn3Q9Z0G9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn3Q9Z0G9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn3Q9Z0G9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn3Q9Z0G9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn3Q9Z0G9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn3Q9Z0G9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn3Q9Z0G9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.69■□□□□ 0.74
Cldn3Q9Z0G9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn3Q9Z0G9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms