Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cr1Q9Z0D9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cr1Q9Z0D9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cr1Q9Z0D9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cr1Q9Z0D9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cr1Q9Z0D9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cr1Q9Z0D9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Cx3cr1Q9Z0D9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cr1Q9Z0D9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Cx3cr1Q9Z0D9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cr1Q9Z0D9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cx3cr1Q9Z0D9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cx3cr1Q9Z0D9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cx3cr1Q9Z0D9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.52■□□□□ 0.24
Cx3cr1Q9Z0D9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cx3cr1Q9Z0D9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.52■□□□□ 0.24
Cx3cr1Q9Z0D9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.52■□□□□ 0.24
Cx3cr1Q9Z0D9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cx3cr1Q9Z0D9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cx3cr1Q9Z0D9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Cx3cr1Q9Z0D9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.52■□□□□ 0.23
Cx3cr1Q9Z0D9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cx3cr1Q9Z0D9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.51■□□□□ 0.23
Cx3cr1Q9Z0D9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cx3cr1Q9Z0D9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.51■□□□□ 0.23
Cx3cr1Q9Z0D9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cx3cr1Q9Z0D9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cx3cr1Q9Z0D9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Cx3cr1Q9Z0D9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cx3cr1Q9Z0D9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cx3cr1Q9Z0D9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cx3cr1Q9Z0D9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cr1Q9Z0D9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Cx3cr1Q9Z0D9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cx3cr1Q9Z0D9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cr1Q9Z0D9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cr1Q9Z0D9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Cx3cr1Q9Z0D9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cr1Q9Z0D9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cr1Q9Z0D9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cr1Q9Z0D9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cr1Q9Z0D9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cr1Q9Z0D9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cr1Q9Z0D9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cx3cr1Q9Z0D9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cx3cr1Q9Z0D9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cx3cr1Q9Z0D9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cx3cr1Q9Z0D9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.47■□□□□ 0.23
Cx3cr1Q9Z0D9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cr1Q9Z0D9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.47■□□□□ 0.23
Cx3cr1Q9Z0D9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cr1Q9Z0D9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cr1Q9Z0D9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cr1Q9Z0D9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.47■□□□□ 0.23
Cx3cr1Q9Z0D9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cr1Q9Z0D9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cr1Q9Z0D9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cr1Q9Z0D9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cr1Q9Z0D9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cx3cr1Q9Z0D9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Cx3cr1Q9Z0D9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cx3cr1Q9Z0D9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cx3cr1Q9Z0D9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Cx3cr1Q9Z0D9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms