Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn5Q9WVD4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn5Q9WVD4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Clcn5Q9WVD4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn5Q9WVD4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcn5Q9WVD4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn5Q9WVD4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn5Q9WVD4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn5Q9WVD4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Clcn5Q9WVD4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.25■□□□□ 0.83
Clcn5Q9WVD4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn5Q9WVD4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.25■□□□□ 0.83
Clcn5Q9WVD4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn5Q9WVD4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn5Q9WVD4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn5Q9WVD4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn5Q9WVD4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn5Q9WVD4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn5Q9WVD4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.24■□□□□ 0.83
Clcn5Q9WVD4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn5Q9WVD4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.24■□□□□ 0.83
Clcn5Q9WVD4 Gm10653-202ENSMUST00000139570 835 ntBASIC20.24■□□□□ 0.83
Clcn5Q9WVD4 Gm9988-201ENSMUST00000069786 435 ntBASIC20.24■□□□□ 0.83
Clcn5Q9WVD4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Clcn5Q9WVD4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn5Q9WVD4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn5Q9WVD4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn5Q9WVD4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Clcn5Q9WVD4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn5Q9WVD4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Clcn5Q9WVD4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn5Q9WVD4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn5Q9WVD4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn5Q9WVD4 Gm22240-201ENSMUST00000175225 82 ntBASIC20.23■□□□□ 0.83
Clcn5Q9WVD4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.23■□□□□ 0.83
Clcn5Q9WVD4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn5Q9WVD4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn5Q9WVD4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn5Q9WVD4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn5Q9WVD4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.23■□□□□ 0.83
Clcn5Q9WVD4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn5Q9WVD4 Gm22325-201ENSMUST00000158904 308 ntBASIC20.22■□□□□ 0.83
Clcn5Q9WVD4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn5Q9WVD4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn5Q9WVD4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn5Q9WVD4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Clcn5Q9WVD4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn5Q9WVD4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn5Q9WVD4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn5Q9WVD4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn5Q9WVD4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Clcn5Q9WVD4 Gm20760-201ENSMUST00000179197 648 ntBASIC20.21■□□□□ 0.83
Clcn5Q9WVD4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Clcn5Q9WVD4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn5Q9WVD4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn5Q9WVD4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.21■□□□□ 0.83
Clcn5Q9WVD4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn5Q9WVD4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Clcn5Q9WVD4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Clcn5Q9WVD4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn5Q9WVD4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn5Q9WVD4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn5Q9WVD4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn5Q9WVD4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Clcn5Q9WVD4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn5Q9WVD4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.2■□□□□ 0.82
Clcn5Q9WVD4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn5Q9WVD4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.2■□□□□ 0.82
Clcn5Q9WVD4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Clcn5Q9WVD4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn5Q9WVD4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Clcn5Q9WVD4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn5Q9WVD4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Clcn5Q9WVD4 Gm10252-201ENSMUST00000209541 832 ntBASIC20.19■□□□□ 0.82
Clcn5Q9WVD4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.19■□□□□ 0.82
Clcn5Q9WVD4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.19■□□□□ 0.82
Clcn5Q9WVD4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn5Q9WVD4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Clcn5Q9WVD4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn5Q9WVD4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn5Q9WVD4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn5Q9WVD4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Clcn5Q9WVD4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn5Q9WVD4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn5Q9WVD4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.18■□□□□ 0.82
Clcn5Q9WVD4 Gm13234-201ENSMUST00000120010 747 ntBASIC20.18■□□□□ 0.82
Clcn5Q9WVD4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.18■□□□□ 0.82
Clcn5Q9WVD4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.18■□□□□ 0.82
Clcn5Q9WVD4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn5Q9WVD4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn5Q9WVD4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn5Q9WVD4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Clcn5Q9WVD4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn5Q9WVD4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn5Q9WVD4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn5Q9WVD4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn5Q9WVD4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn5Q9WVD4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Clcn5Q9WVD4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.17■□□□□ 0.82
Clcn5Q9WVD4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms