Protein–RNA interactions for Protein: Q9WTN0

Ggps1, Geranylgeranyl pyrophosphate synthase, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1Q9WTN0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ggps1Q9WTN0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.75■■□□□ 1.07
Ggps1Q9WTN0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Ggps1Q9WTN0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ggps1Q9WTN0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.75■■□□□ 1.07
Ggps1Q9WTN0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ggps1Q9WTN0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.74■■□□□ 1.07
Ggps1Q9WTN0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ggps1Q9WTN0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ggps1Q9WTN0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Ggps1Q9WTN0 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.74■■□□□ 1.07
Ggps1Q9WTN0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ggps1Q9WTN0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ggps1Q9WTN0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.73■■□□□ 1.07
Ggps1Q9WTN0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ggps1Q9WTN0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ggps1Q9WTN0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.73■■□□□ 1.07
Ggps1Q9WTN0 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.73■■□□□ 1.07
Ggps1Q9WTN0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ggps1Q9WTN0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ggps1Q9WTN0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ggps1Q9WTN0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ggps1Q9WTN0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.73■■□□□ 1.07
Ggps1Q9WTN0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ggps1Q9WTN0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ggps1Q9WTN0 AA386476-201ENSMUST00000098781 1665 ntBASIC21.72■■□□□ 1.07
Ggps1Q9WTN0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ggps1Q9WTN0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ggps1Q9WTN0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ggps1Q9WTN0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ggps1Q9WTN0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ggps1Q9WTN0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ggps1Q9WTN0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ggps1Q9WTN0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
Ggps1Q9WTN0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ggps1Q9WTN0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ggps1Q9WTN0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ggps1Q9WTN0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ggps1Q9WTN0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ggps1Q9WTN0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Ggps1Q9WTN0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.71■■□□□ 1.07
Ggps1Q9WTN0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.71■■□□□ 1.07
Ggps1Q9WTN0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ggps1Q9WTN0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.71■■□□□ 1.07
Ggps1Q9WTN0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ggps1Q9WTN0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.71■■□□□ 1.07
Ggps1Q9WTN0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ggps1Q9WTN0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ggps1Q9WTN0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ggps1Q9WTN0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
Ggps1Q9WTN0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ggps1Q9WTN0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ggps1Q9WTN0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ggps1Q9WTN0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ggps1Q9WTN0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ggps1Q9WTN0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ggps1Q9WTN0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
Ggps1Q9WTN0 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.7■■□□□ 1.06
Ggps1Q9WTN0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ggps1Q9WTN0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ggps1Q9WTN0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ggps1Q9WTN0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ggps1Q9WTN0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ggps1Q9WTN0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ggps1Q9WTN0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Ggps1Q9WTN0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ggps1Q9WTN0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ggps1Q9WTN0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ggps1Q9WTN0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ggps1Q9WTN0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ggps1Q9WTN0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Ggps1Q9WTN0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ggps1Q9WTN0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ggps1Q9WTN0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ggps1Q9WTN0 Gm38205-201ENSMUST00000192243 258 ntBASIC21.68■■□□□ 1.06
Ggps1Q9WTN0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ggps1Q9WTN0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Ggps1Q9WTN0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ggps1Q9WTN0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.68■■□□□ 1.06
Ggps1Q9WTN0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ggps1Q9WTN0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
Ggps1Q9WTN0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ggps1Q9WTN0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ggps1Q9WTN0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ggps1Q9WTN0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.67■■□□□ 1.06
Ggps1Q9WTN0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.67■■□□□ 1.06
Ggps1Q9WTN0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Ggps1Q9WTN0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ggps1Q9WTN0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ggps1Q9WTN0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Ggps1Q9WTN0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ggps1Q9WTN0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ggps1Q9WTN0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Ggps1Q9WTN0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.66■■□□□ 1.06
Ggps1Q9WTN0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.66■■□□□ 1.06
Ggps1Q9WTN0 Gm13146-201ENSMUST00000118508 780 ntBASIC21.66■■□□□ 1.06
Ggps1Q9WTN0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.66■■□□□ 1.06
Ggps1Q9WTN0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.66■■□□□ 1.06
Ggps1Q9WTN0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ggps1Q9WTN0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms