Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf4Q9QZS2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf4Q9QZS2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.69■□□□□ 0.74
Rnf4Q9QZS2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf4Q9QZS2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf4Q9QZS2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf4Q9QZS2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf4Q9QZS2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf4Q9QZS2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf4Q9QZS2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.69■□□□□ 0.74
Rnf4Q9QZS2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf4Q9QZS2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf4Q9QZS2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.69■□□□□ 0.74
Rnf4Q9QZS2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rnf4Q9QZS2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.68■□□□□ 0.74
Rnf4Q9QZS2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf4Q9QZS2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf4Q9QZS2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf4Q9QZS2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.68■□□□□ 0.74
Rnf4Q9QZS2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf4Q9QZS2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf4Q9QZS2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf4Q9QZS2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf4Q9QZS2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf4Q9QZS2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf4Q9QZS2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf4Q9QZS2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf4Q9QZS2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf4Q9QZS2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf4Q9QZS2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf4Q9QZS2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf4Q9QZS2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rnf4Q9QZS2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf4Q9QZS2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf4Q9QZS2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf4Q9QZS2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf4Q9QZS2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf4Q9QZS2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rnf4Q9QZS2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf4Q9QZS2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf4Q9QZS2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf4Q9QZS2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf4Q9QZS2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf4Q9QZS2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Rnf4Q9QZS2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf4Q9QZS2 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.66■□□□□ 0.74
Rnf4Q9QZS2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf4Q9QZS2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf4Q9QZS2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rnf4Q9QZS2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.66■□□□□ 0.74
Rnf4Q9QZS2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf4Q9QZS2 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.66■□□□□ 0.74
Rnf4Q9QZS2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf4Q9QZS2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf4Q9QZS2 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.65■□□□□ 0.74
Rnf4Q9QZS2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf4Q9QZS2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Rnf4Q9QZS2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf4Q9QZS2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf4Q9QZS2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Rnf4Q9QZS2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Rnf4Q9QZS2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf4Q9QZS2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Rnf4Q9QZS2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Rnf4Q9QZS2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf4Q9QZS2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf4Q9QZS2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf4Q9QZS2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf4Q9QZS2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Rnf4Q9QZS2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf4Q9QZS2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf4Q9QZS2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rnf4Q9QZS2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf4Q9QZS2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf4Q9QZS2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.63■□□□□ 0.73
Rnf4Q9QZS2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf4Q9QZS2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf4Q9QZS2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf4Q9QZS2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf4Q9QZS2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf4Q9QZS2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Rnf4Q9QZS2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf4Q9QZS2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf4Q9QZS2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf4Q9QZS2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Rnf4Q9QZS2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf4Q9QZS2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf4Q9QZS2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms