Protein–RNA interactions for Protein: Q9QY14

Foxe3, Forkhead box protein E3, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe3Q9QY14 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Foxe3Q9QY14 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Foxe3Q9QY14 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Foxe3Q9QY14 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Foxe3Q9QY14 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.02■□□□□ 0.96
Foxe3Q9QY14 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Foxe3Q9QY14 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Foxe3Q9QY14 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Foxe3Q9QY14 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Foxe3Q9QY14 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Foxe3Q9QY14 Gm37856-201ENSMUST00000191634 999 ntBASIC21.01■□□□□ 0.95
Foxe3Q9QY14 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Foxe3Q9QY14 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Foxe3Q9QY14 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Foxe3Q9QY14 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Foxe3Q9QY14 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Foxe3Q9QY14 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Foxe3Q9QY14 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21■□□□□ 0.95
Foxe3Q9QY14 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Foxe3Q9QY14 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxe3Q9QY14 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.99■□□□□ 0.95
Foxe3Q9QY14 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxe3Q9QY14 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxe3Q9QY14 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.99■□□□□ 0.95
Foxe3Q9QY14 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Foxe3Q9QY14 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxe3Q9QY14 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.99■□□□□ 0.95
Foxe3Q9QY14 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.99■□□□□ 0.95
Foxe3Q9QY14 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxe3Q9QY14 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxe3Q9QY14 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Foxe3Q9QY14 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Foxe3Q9QY14 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Foxe3Q9QY14 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.98■□□□□ 0.95
Foxe3Q9QY14 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Foxe3Q9QY14 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Foxe3Q9QY14 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Foxe3Q9QY14 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxe3Q9QY14 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxe3Q9QY14 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.97■□□□□ 0.95
Foxe3Q9QY14 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.97■□□□□ 0.95
Foxe3Q9QY14 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxe3Q9QY14 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxe3Q9QY14 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Foxe3Q9QY14 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxe3Q9QY14 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxe3Q9QY14 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.97■□□□□ 0.95
Foxe3Q9QY14 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.97■□□□□ 0.95
Foxe3Q9QY14 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxe3Q9QY14 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxe3Q9QY14 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxe3Q9QY14 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.96■□□□□ 0.95
Foxe3Q9QY14 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.96■□□□□ 0.95
Foxe3Q9QY14 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxe3Q9QY14 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxe3Q9QY14 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.96■□□□□ 0.95
Foxe3Q9QY14 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxe3Q9QY14 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.95■□□□□ 0.94
Foxe3Q9QY14 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Foxe3Q9QY14 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxe3Q9QY14 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxe3Q9QY14 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxe3Q9QY14 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxe3Q9QY14 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxe3Q9QY14 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxe3Q9QY14 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Foxe3Q9QY14 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxe3Q9QY14 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.95■□□□□ 0.94
Foxe3Q9QY14 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Foxe3Q9QY14 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.95■□□□□ 0.94
Foxe3Q9QY14 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxe3Q9QY14 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxe3Q9QY14 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxe3Q9QY14 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
Foxe3Q9QY14 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Foxe3Q9QY14 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxe3Q9QY14 AA386476-201ENSMUST00000098781 1665 ntBASIC20.94■□□□□ 0.94
Foxe3Q9QY14 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxe3Q9QY14 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Foxe3Q9QY14 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.94■□□□□ 0.94
Foxe3Q9QY14 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.94■□□□□ 0.94
Foxe3Q9QY14 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxe3Q9QY14 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxe3Q9QY14 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Foxe3Q9QY14 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Foxe3Q9QY14 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Foxe3Q9QY14 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxe3Q9QY14 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxe3Q9QY14 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxe3Q9QY14 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Foxe3Q9QY14 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxe3Q9QY14 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Foxe3Q9QY14 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.93■□□□□ 0.94
Foxe3Q9QY14 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Foxe3Q9QY14 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Foxe3Q9QY14 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Foxe3Q9QY14 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Foxe3Q9QY14 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Foxe3Q9QY14 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.92■□□□□ 0.94
Foxe3Q9QY14 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms