Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom3Q9QXN0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom3Q9QXN0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom3Q9QXN0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom3Q9QXN0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.67■□□□□ 0.74
Shroom3Q9QXN0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.67■□□□□ 0.74
Shroom3Q9QXN0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom3Q9QXN0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom3Q9QXN0 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.67■□□□□ 0.74
Shroom3Q9QXN0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Shroom3Q9QXN0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom3Q9QXN0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Shroom3Q9QXN0 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.66■□□□□ 0.74
Shroom3Q9QXN0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom3Q9QXN0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom3Q9QXN0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom3Q9QXN0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom3Q9QXN0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom3Q9QXN0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom3Q9QXN0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom3Q9QXN0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Shroom3Q9QXN0 Notumos-201ENSMUST00000151998 2659 ntBASIC19.66■□□□□ 0.74
Shroom3Q9QXN0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shroom3Q9QXN0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shroom3Q9QXN0 Gm10849-201ENSMUST00000100397 618 ntBASIC19.65■□□□□ 0.74
Shroom3Q9QXN0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.65■□□□□ 0.74
Shroom3Q9QXN0 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.65■□□□□ 0.74
Shroom3Q9QXN0 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.65■□□□□ 0.74
Shroom3Q9QXN0 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.65■□□□□ 0.74
Shroom3Q9QXN0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.65■□□□□ 0.74
Shroom3Q9QXN0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shroom3Q9QXN0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shroom3Q9QXN0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.65■□□□□ 0.74
Shroom3Q9QXN0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
Shroom3Q9QXN0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shroom3Q9QXN0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shroom3Q9QXN0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shroom3Q9QXN0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.64■□□□□ 0.74
Shroom3Q9QXN0 Gm40848-201ENSMUST00000221998 324 ntBASIC19.64■□□□□ 0.74
Shroom3Q9QXN0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Shroom3Q9QXN0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Shroom3Q9QXN0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Shroom3Q9QXN0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Shroom3Q9QXN0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Shroom3Q9QXN0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shroom3Q9QXN0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shroom3Q9QXN0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Shroom3Q9QXN0 Gm27405-201ENSMUST00000184201 112 ntBASIC19.64■□□□□ 0.73
Shroom3Q9QXN0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Shroom3Q9QXN0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shroom3Q9QXN0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shroom3Q9QXN0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shroom3Q9QXN0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shroom3Q9QXN0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.63■□□□□ 0.73
Shroom3Q9QXN0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shroom3Q9QXN0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shroom3Q9QXN0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shroom3Q9QXN0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shroom3Q9QXN0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.63■□□□□ 0.73
Shroom3Q9QXN0 Gm37179-201ENSMUST00000194862 823 ntBASIC19.63■□□□□ 0.73
Shroom3Q9QXN0 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.63■□□□□ 0.73
Shroom3Q9QXN0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shroom3Q9QXN0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shroom3Q9QXN0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Shroom3Q9QXN0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom3Q9QXN0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom3Q9QXN0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom3Q9QXN0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom3Q9QXN0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom3Q9QXN0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.62■□□□□ 0.73
Shroom3Q9QXN0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom3Q9QXN0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom3Q9QXN0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom3Q9QXN0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom3Q9QXN0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom3Q9QXN0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom3Q9QXN0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom3Q9QXN0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Shroom3Q9QXN0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shroom3Q9QXN0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.61■□□□□ 0.73
Shroom3Q9QXN0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shroom3Q9QXN0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Shroom3Q9QXN0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shroom3Q9QXN0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shroom3Q9QXN0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.61■□□□□ 0.73
Shroom3Q9QXN0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shroom3Q9QXN0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shroom3Q9QXN0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Shroom3Q9QXN0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shroom3Q9QXN0 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.6■□□□□ 0.73
Shroom3Q9QXN0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Shroom3Q9QXN0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Shroom3Q9QXN0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shroom3Q9QXN0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Shroom3Q9QXN0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.6■□□□□ 0.73
Shroom3Q9QXN0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shroom3Q9QXN0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.6■□□□□ 0.73
Shroom3Q9QXN0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Shroom3Q9QXN0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Shroom3Q9QXN0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms