Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Crlf1Q9JM58 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Crlf1Q9JM58 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Crlf1Q9JM58 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Crlf1Q9JM58 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Crlf1Q9JM58 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Crlf1Q9JM58 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Crlf1Q9JM58 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Crlf1Q9JM58 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Crlf1Q9JM58 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.75■□□□□ 0.11
Crlf1Q9JM58 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Crlf1Q9JM58 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Crlf1Q9JM58 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Crlf1Q9JM58 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Crlf1Q9JM58 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Crlf1Q9JM58 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Crlf1Q9JM58 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Crlf1Q9JM58 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Crlf1Q9JM58 Gm38205-201ENSMUST00000192243 258 ntBASIC15.74■□□□□ 0.11
Crlf1Q9JM58 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.74■□□□□ 0.11
Crlf1Q9JM58 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Crlf1Q9JM58 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Crlf1Q9JM58 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Crlf1Q9JM58 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Crlf1Q9JM58 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Crlf1Q9JM58 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Crlf1Q9JM58 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Crlf1Q9JM58 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Crlf1Q9JM58 Gm13534-201ENSMUST00000121169 513 ntBASIC15.73■□□□□ 0.11
Crlf1Q9JM58 Gm26524-201ENSMUST00000192339 390 ntBASIC15.73■□□□□ 0.11
Crlf1Q9JM58 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.73■□□□□ 0.11
Crlf1Q9JM58 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Crlf1Q9JM58 Rab3c-203ENSMUST00000224180 967 ntBASIC15.73■□□□□ 0.11
Crlf1Q9JM58 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Crlf1Q9JM58 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Crlf1Q9JM58 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Crlf1Q9JM58 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Crlf1Q9JM58 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Crlf1Q9JM58 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Crlf1Q9JM58 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Crlf1Q9JM58 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Crlf1Q9JM58 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Crlf1Q9JM58 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Crlf1Q9JM58 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Crlf1Q9JM58 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Crlf1Q9JM58 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Crlf1Q9JM58 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Crlf1Q9JM58 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.72■□□□□ 0.11
Crlf1Q9JM58 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Crlf1Q9JM58 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Crlf1Q9JM58 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Crlf1Q9JM58 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Crlf1Q9JM58 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Crlf1Q9JM58 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Crlf1Q9JM58 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Crlf1Q9JM58 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Crlf1Q9JM58 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Crlf1Q9JM58 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Crlf1Q9JM58 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Crlf1Q9JM58 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Crlf1Q9JM58 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Crlf1Q9JM58 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Crlf1Q9JM58 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Crlf1Q9JM58 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crlf1Q9JM58 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crlf1Q9JM58 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.7■□□□□ 0.1
Crlf1Q9JM58 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.7■□□□□ 0.1
Crlf1Q9JM58 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.7■□□□□ 0.1
Crlf1Q9JM58 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crlf1Q9JM58 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Crlf1Q9JM58 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crlf1Q9JM58 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crlf1Q9JM58 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Crlf1Q9JM58 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Crlf1Q9JM58 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.69■□□□□ 0.1
Crlf1Q9JM58 Gm5643-201ENSMUST00000117081 966 ntBASIC15.69■□□□□ 0.1
Crlf1Q9JM58 Gm715-201ENSMUST00000117865 831 ntBASIC15.69■□□□□ 0.1
Crlf1Q9JM58 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.69■□□□□ 0.1
Crlf1Q9JM58 Gm27275-201ENSMUST00000184318 272 ntBASIC15.69■□□□□ 0.1
Crlf1Q9JM58 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Crlf1Q9JM58 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.69■□□□□ 0.1
Crlf1Q9JM58 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crlf1Q9JM58 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crlf1Q9JM58 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crlf1Q9JM58 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Crlf1Q9JM58 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.69■□□□□ 0.1
Crlf1Q9JM58 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Crlf1Q9JM58 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
Crlf1Q9JM58 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crlf1Q9JM58 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Crlf1Q9JM58 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Crlf1Q9JM58 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Crlf1Q9JM58 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Crlf1Q9JM58 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Crlf1Q9JM58 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Crlf1Q9JM58 Gm11643-201ENSMUST00000119578 864 ntBASIC15.68■□□□□ 0.1
Crlf1Q9JM58 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Crlf1Q9JM58 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Crlf1Q9JM58 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.68■□□□□ 0.1
Crlf1Q9JM58 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms