Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Scn5aQ9JJV9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn5aQ9JJV9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn5aQ9JJV9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Scn5aQ9JJV9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.44■□□□□ 0.86
Scn5aQ9JJV9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scn5aQ9JJV9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
Scn5aQ9JJV9 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.44■□□□□ 0.86
Scn5aQ9JJV9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn5aQ9JJV9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn5aQ9JJV9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn5aQ9JJV9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn5aQ9JJV9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn5aQ9JJV9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scn5aQ9JJV9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn5aQ9JJV9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn5aQ9JJV9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scn5aQ9JJV9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Scn5aQ9JJV9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Scn5aQ9JJV9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Scn5aQ9JJV9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn5aQ9JJV9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn5aQ9JJV9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn5aQ9JJV9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn5aQ9JJV9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.42■□□□□ 0.86
Scn5aQ9JJV9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn5aQ9JJV9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.42■□□□□ 0.86
Scn5aQ9JJV9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn5aQ9JJV9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn5aQ9JJV9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.41■□□□□ 0.86
Scn5aQ9JJV9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn5aQ9JJV9 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.41■□□□□ 0.86
Scn5aQ9JJV9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn5aQ9JJV9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Scn5aQ9JJV9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.41■□□□□ 0.86
Scn5aQ9JJV9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn5aQ9JJV9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn5aQ9JJV9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Scn5aQ9JJV9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.4■□□□□ 0.86
Scn5aQ9JJV9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scn5aQ9JJV9 Gm20760-201ENSMUST00000179197 648 ntBASIC20.4■□□□□ 0.86
Scn5aQ9JJV9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.4■□□□□ 0.86
Scn5aQ9JJV9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn5aQ9JJV9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
Scn5aQ9JJV9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Scn5aQ9JJV9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scn5aQ9JJV9 Gm13534-201ENSMUST00000121169 513 ntBASIC20.39■□□□□ 0.86
Scn5aQ9JJV9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
Scn5aQ9JJV9 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.39■□□□□ 0.86
Scn5aQ9JJV9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Scn5aQ9JJV9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scn5aQ9JJV9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.39■□□□□ 0.86
Scn5aQ9JJV9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Scn5aQ9JJV9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn5aQ9JJV9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn5aQ9JJV9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn5aQ9JJV9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.39■□□□□ 0.85
Scn5aQ9JJV9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.38■□□□□ 0.85
Scn5aQ9JJV9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scn5aQ9JJV9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn5aQ9JJV9 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.38■□□□□ 0.85
Scn5aQ9JJV9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Scn5aQ9JJV9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Scn5aQ9JJV9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scn5aQ9JJV9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn5aQ9JJV9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Scn5aQ9JJV9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn5aQ9JJV9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.37■□□□□ 0.85
Scn5aQ9JJV9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scn5aQ9JJV9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Scn5aQ9JJV9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.36■□□□□ 0.85
Scn5aQ9JJV9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn5aQ9JJV9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scn5aQ9JJV9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn5aQ9JJV9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn5aQ9JJV9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn5aQ9JJV9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn5aQ9JJV9 Gm13168-201ENSMUST00000121771 632 ntBASIC20.36■□□□□ 0.85
Scn5aQ9JJV9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Scn5aQ9JJV9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scn5aQ9JJV9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.36■□□□□ 0.85
Scn5aQ9JJV9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn5aQ9JJV9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scn5aQ9JJV9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn5aQ9JJV9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Scn5aQ9JJV9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn5aQ9JJV9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Scn5aQ9JJV9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn5aQ9JJV9 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.35■□□□□ 0.85
Scn5aQ9JJV9 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.35■□□□□ 0.85
Scn5aQ9JJV9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.35■□□□□ 0.85
Scn5aQ9JJV9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scn5aQ9JJV9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Scn5aQ9JJV9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.34■□□□□ 0.85
Scn5aQ9JJV9 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.34■□□□□ 0.85
Scn5aQ9JJV9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn5aQ9JJV9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.34■□□□□ 0.85
Scn5aQ9JJV9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn5aQ9JJV9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Scn5aQ9JJV9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms