Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbfox1Q9JJ43 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbfox1Q9JJ43 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rbfox1Q9JJ43 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rbfox1Q9JJ43 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rbfox1Q9JJ43 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Rbfox1Q9JJ43 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rbfox1Q9JJ43 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rbfox1Q9JJ43 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rbfox1Q9JJ43 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rbfox1Q9JJ43 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.6■□□□□ 0.25
Rbfox1Q9JJ43 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rbfox1Q9JJ43 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rbfox1Q9JJ43 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rbfox1Q9JJ43 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rbfox1Q9JJ43 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rbfox1Q9JJ43 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rbfox1Q9JJ43 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rbfox1Q9JJ43 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rbfox1Q9JJ43 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rbfox1Q9JJ43 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rbfox1Q9JJ43 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rbfox1Q9JJ43 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rbfox1Q9JJ43 Gm15546-201ENSMUST00000122095 826 ntBASIC16.59■□□□□ 0.25
Rbfox1Q9JJ43 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.59■□□□□ 0.25
Rbfox1Q9JJ43 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rbfox1Q9JJ43 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rbfox1Q9JJ43 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rbfox1Q9JJ43 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rbfox1Q9JJ43 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.59■□□□□ 0.25
Rbfox1Q9JJ43 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.59■□□□□ 0.25
Rbfox1Q9JJ43 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rbfox1Q9JJ43 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rbfox1Q9JJ43 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.58■□□□□ 0.24
Rbfox1Q9JJ43 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.58■□□□□ 0.24
Rbfox1Q9JJ43 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.58■□□□□ 0.24
Rbfox1Q9JJ43 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rbfox1Q9JJ43 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rbfox1Q9JJ43 AA386476-201ENSMUST00000098781 1665 ntBASIC16.58■□□□□ 0.24
Rbfox1Q9JJ43 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rbfox1Q9JJ43 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rbfox1Q9JJ43 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rbfox1Q9JJ43 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rbfox1Q9JJ43 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rbfox1Q9JJ43 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rbfox1Q9JJ43 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rbfox1Q9JJ43 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rbfox1Q9JJ43 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rbfox1Q9JJ43 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rbfox1Q9JJ43 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rbfox1Q9JJ43 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rbfox1Q9JJ43 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.57■□□□□ 0.24
Rbfox1Q9JJ43 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rbfox1Q9JJ43 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rbfox1Q9JJ43 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Rbfox1Q9JJ43 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rbfox1Q9JJ43 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Rbfox1Q9JJ43 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rbfox1Q9JJ43 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rbfox1Q9JJ43 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rbfox1Q9JJ43 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rbfox1Q9JJ43 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.56■□□□□ 0.24
Rbfox1Q9JJ43 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rbfox1Q9JJ43 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rbfox1Q9JJ43 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.56■□□□□ 0.24
Rbfox1Q9JJ43 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rbfox1Q9JJ43 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rbfox1Q9JJ43 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rbfox1Q9JJ43 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rbfox1Q9JJ43 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Gm22238-201ENSMUST00000175222 88 ntBASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rbfox1Q9JJ43 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rbfox1Q9JJ43 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rbfox1Q9JJ43 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rbfox1Q9JJ43 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rbfox1Q9JJ43 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rbfox1Q9JJ43 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rbfox1Q9JJ43 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rbfox1Q9JJ43 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rbfox1Q9JJ43 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
Rbfox1Q9JJ43 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rbfox1Q9JJ43 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rbfox1Q9JJ43 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms