Protein–RNA interactions for Protein: Q9EPB8

Vmn1r54, Vomeronasal type-1 receptor 54, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r54Q9EPB8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vmn1r54Q9EPB8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vmn1r54Q9EPB8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Vmn1r54Q9EPB8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r54Q9EPB8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r54Q9EPB8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.82■□□□□ 0.12
Vmn1r54Q9EPB8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r54Q9EPB8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vmn1r54Q9EPB8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r54Q9EPB8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vmn1r54Q9EPB8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r54Q9EPB8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Vmn1r54Q9EPB8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.81■□□□□ 0.12
Vmn1r54Q9EPB8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r54Q9EPB8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r54Q9EPB8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r54Q9EPB8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r54Q9EPB8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.81■□□□□ 0.12
Vmn1r54Q9EPB8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r54Q9EPB8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r54Q9EPB8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r54Q9EPB8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r54Q9EPB8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r54Q9EPB8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r54Q9EPB8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r54Q9EPB8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vmn1r54Q9EPB8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r54Q9EPB8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r54Q9EPB8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Vmn1r54Q9EPB8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r54Q9EPB8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r54Q9EPB8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r54Q9EPB8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.8■□□□□ 0.12
Vmn1r54Q9EPB8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r54Q9EPB8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Vmn1r54Q9EPB8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r54Q9EPB8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r54Q9EPB8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r54Q9EPB8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r54Q9EPB8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r54Q9EPB8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r54Q9EPB8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r54Q9EPB8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r54Q9EPB8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r54Q9EPB8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r54Q9EPB8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vmn1r54Q9EPB8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
Vmn1r54Q9EPB8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r54Q9EPB8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r54Q9EPB8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Vmn1r54Q9EPB8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vmn1r54Q9EPB8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Vmn1r54Q9EPB8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r54Q9EPB8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r54Q9EPB8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r54Q9EPB8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Vmn1r54Q9EPB8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r54Q9EPB8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r54Q9EPB8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r54Q9EPB8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r54Q9EPB8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Vmn1r54Q9EPB8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r54Q9EPB8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r54Q9EPB8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r54Q9EPB8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.78■□□□□ 0.12
Vmn1r54Q9EPB8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.78■□□□□ 0.12
Vmn1r54Q9EPB8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r54Q9EPB8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r54Q9EPB8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r54Q9EPB8 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.78■□□□□ 0.12
Vmn1r54Q9EPB8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r54Q9EPB8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Vmn1r54Q9EPB8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r54Q9EPB8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r54Q9EPB8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r54Q9EPB8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r54Q9EPB8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Vmn1r54Q9EPB8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r54Q9EPB8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r54Q9EPB8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.77■□□□□ 0.12
Vmn1r54Q9EPB8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r54Q9EPB8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vmn1r54Q9EPB8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vmn1r54Q9EPB8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.77■□□□□ 0.11
Vmn1r54Q9EPB8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vmn1r54Q9EPB8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vmn1r54Q9EPB8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.77■□□□□ 0.11
Vmn1r54Q9EPB8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.76■□□□□ 0.11
Vmn1r54Q9EPB8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Vmn1r54Q9EPB8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r54Q9EPB8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r54Q9EPB8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r54Q9EPB8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Vmn1r54Q9EPB8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r54Q9EPB8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.76■□□□□ 0.11
Vmn1r54Q9EPB8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
Vmn1r54Q9EPB8 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.76■□□□□ 0.11
Vmn1r54Q9EPB8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.76■□□□□ 0.11
Vmn1r54Q9EPB8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Vmn1r54Q9EPB8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms