Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.09■□□□□ 0.49
Cdc40Q9DC48 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.09■□□□□ 0.49
Cdc40Q9DC48 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdc40Q9DC48 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Cdc40Q9DC48 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdc40Q9DC48 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdc40Q9DC48 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cdc40Q9DC48 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdc40Q9DC48 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.08■□□□□ 0.49
Cdc40Q9DC48 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdc40Q9DC48 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdc40Q9DC48 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdc40Q9DC48 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdc40Q9DC48 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdc40Q9DC48 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdc40Q9DC48 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cdc40Q9DC48 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdc40Q9DC48 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdc40Q9DC48 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdc40Q9DC48 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdc40Q9DC48 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdc40Q9DC48 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdc40Q9DC48 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.07■□□□□ 0.48
Cdc40Q9DC48 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdc40Q9DC48 Gm26833-201ENSMUST00000180899 440 ntBASIC18.07■□□□□ 0.48
Cdc40Q9DC48 Spcs1-204ENSMUST00000226782 949 ntBASIC18.07■□□□□ 0.48
Cdc40Q9DC48 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdc40Q9DC48 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdc40Q9DC48 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdc40Q9DC48 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdc40Q9DC48 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdc40Q9DC48 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cdc40Q9DC48 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdc40Q9DC48 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdc40Q9DC48 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdc40Q9DC48 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdc40Q9DC48 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdc40Q9DC48 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdc40Q9DC48 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Gm5874-201ENSMUST00000096101 508 ntBASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdc40Q9DC48 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdc40Q9DC48 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Cdc40Q9DC48 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdc40Q9DC48 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Cdc40Q9DC48 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cdc40Q9DC48 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdc40Q9DC48 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdc40Q9DC48 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Cdc40Q9DC48 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdc40Q9DC48 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdc40Q9DC48 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cdc40Q9DC48 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.03■□□□□ 0.48
Cdc40Q9DC48 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdc40Q9DC48 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdc40Q9DC48 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdc40Q9DC48 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cdc40Q9DC48 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdc40Q9DC48 Gm40848-201ENSMUST00000221998 324 ntBASIC18.03■□□□□ 0.48
Cdc40Q9DC48 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdc40Q9DC48 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Cdc40Q9DC48 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdc40Q9DC48 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdc40Q9DC48 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.02■□□□□ 0.48
Cdc40Q9DC48 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.02■□□□□ 0.48
Cdc40Q9DC48 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdc40Q9DC48 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdc40Q9DC48 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdc40Q9DC48 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdc40Q9DC48 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdc40Q9DC48 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdc40Q9DC48 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Cdc40Q9DC48 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdc40Q9DC48 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cdc40Q9DC48 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Cdc40Q9DC48 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Cdc40Q9DC48 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Cdc40Q9DC48 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms