Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp8Q9DB85 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp8Q9DB85 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp8Q9DB85 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp8Q9DB85 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp8Q9DB85 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.17■□□□□ 0.66
Rrp8Q9DB85 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp8Q9DB85 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Rrp8Q9DB85 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp8Q9DB85 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.17■□□□□ 0.66
Rrp8Q9DB85 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp8Q9DB85 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp8Q9DB85 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp8Q9DB85 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp8Q9DB85 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rrp8Q9DB85 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rrp8Q9DB85 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rrp8Q9DB85 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rrp8Q9DB85 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rrp8Q9DB85 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rrp8Q9DB85 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rrp8Q9DB85 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rrp8Q9DB85 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rrp8Q9DB85 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rrp8Q9DB85 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rrp8Q9DB85 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rrp8Q9DB85 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rrp8Q9DB85 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Rrp8Q9DB85 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rrp8Q9DB85 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rrp8Q9DB85 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rrp8Q9DB85 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rrp8Q9DB85 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rrp8Q9DB85 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.14■□□□□ 0.65
Rrp8Q9DB85 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rrp8Q9DB85 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rrp8Q9DB85 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.14■□□□□ 0.65
Rrp8Q9DB85 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rrp8Q9DB85 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rrp8Q9DB85 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rrp8Q9DB85 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rrp8Q9DB85 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.14■□□□□ 0.65
Rrp8Q9DB85 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rrp8Q9DB85 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rrp8Q9DB85 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rrp8Q9DB85 Gm10653-202ENSMUST00000139570 835 ntBASIC19.13■□□□□ 0.65
Rrp8Q9DB85 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rrp8Q9DB85 Gm4968-201ENSMUST00000071458 858 ntBASIC19.13■□□□□ 0.65
Rrp8Q9DB85 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.13■□□□□ 0.65
Rrp8Q9DB85 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rrp8Q9DB85 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rrp8Q9DB85 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rrp8Q9DB85 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rrp8Q9DB85 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rrp8Q9DB85 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rrp8Q9DB85 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rrp8Q9DB85 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.12■□□□□ 0.65
Rrp8Q9DB85 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rrp8Q9DB85 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rrp8Q9DB85 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rrp8Q9DB85 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rrp8Q9DB85 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rrp8Q9DB85 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rrp8Q9DB85 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Rrp8Q9DB85 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.11■□□□□ 0.65
Rrp8Q9DB85 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.11■□□□□ 0.65
Rrp8Q9DB85 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rrp8Q9DB85 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rrp8Q9DB85 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rrp8Q9DB85 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rrp8Q9DB85 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rrp8Q9DB85 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rrp8Q9DB85 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rrp8Q9DB85 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.1■□□□□ 0.65
Rrp8Q9DB85 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rrp8Q9DB85 Gm13146-201ENSMUST00000118508 780 ntBASIC19.1■□□□□ 0.65
Rrp8Q9DB85 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.1■□□□□ 0.65
Rrp8Q9DB85 Gm5408-201ENSMUST00000197998 747 ntBASIC19.1■□□□□ 0.65
Rrp8Q9DB85 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.1■□□□□ 0.65
Rrp8Q9DB85 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rrp8Q9DB85 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.1■□□□□ 0.65
Rrp8Q9DB85 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Rrp8Q9DB85 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rrp8Q9DB85 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rrp8Q9DB85 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rrp8Q9DB85 Gm7290-201ENSMUST00000104990 617 ntBASIC19.09■□□□□ 0.65
Rrp8Q9DB85 Gm12918-201ENSMUST00000120234 636 ntBASIC19.09■□□□□ 0.65
Rrp8Q9DB85 Gm15710-201ENSMUST00000121821 636 ntBASIC19.09■□□□□ 0.65
Rrp8Q9DB85 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.09■□□□□ 0.65
Rrp8Q9DB85 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.09■□□□□ 0.65
Rrp8Q9DB85 Gm20760-201ENSMUST00000179197 648 ntBASIC19.09■□□□□ 0.65
Rrp8Q9DB85 Gm5075-201ENSMUST00000196916 622 ntBASIC19.09■□□□□ 0.65
Rrp8Q9DB85 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.09■□□□□ 0.65
Rrp8Q9DB85 Gm6365-201ENSMUST00000054711 744 ntBASIC19.09■□□□□ 0.65
Rrp8Q9DB85 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.09■□□□□ 0.65
Rrp8Q9DB85 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.09■□□□□ 0.65
Rrp8Q9DB85 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.09■□□□□ 0.65
Rrp8Q9DB85 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rrp8Q9DB85 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rrp8Q9DB85 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms