Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gtf3c6Q9D8P7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gtf3c6Q9D8P7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gtf3c6Q9D8P7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.84■□□□□ 0.93
Gtf3c6Q9D8P7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gtf3c6Q9D8P7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gtf3c6Q9D8P7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gtf3c6Q9D8P7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gtf3c6Q9D8P7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gtf3c6Q9D8P7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gtf3c6Q9D8P7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.83■□□□□ 0.92
Gtf3c6Q9D8P7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gtf3c6Q9D8P7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gtf3c6Q9D8P7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gtf3c6Q9D8P7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gtf3c6Q9D8P7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gtf3c6Q9D8P7 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.83■□□□□ 0.92
Gtf3c6Q9D8P7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c6Q9D8P7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c6Q9D8P7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.82■□□□□ 0.92
Gtf3c6Q9D8P7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c6Q9D8P7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c6Q9D8P7 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.82■□□□□ 0.92
Gtf3c6Q9D8P7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c6Q9D8P7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Gtf3c6Q9D8P7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gtf3c6Q9D8P7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf3c6Q9D8P7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf3c6Q9D8P7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf3c6Q9D8P7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf3c6Q9D8P7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf3c6Q9D8P7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.81■□□□□ 0.92
Gtf3c6Q9D8P7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gtf3c6Q9D8P7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Gtf3c6Q9D8P7 Golph3-202ENSMUST00000226517 2359 ntBASIC20.81■□□□□ 0.92
Gtf3c6Q9D8P7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c6Q9D8P7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c6Q9D8P7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c6Q9D8P7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c6Q9D8P7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c6Q9D8P7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c6Q9D8P7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c6Q9D8P7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.8■□□□□ 0.92
Gtf3c6Q9D8P7 Gm21956-201ENSMUST00000179946 522 ntBASIC20.8■□□□□ 0.92
Gtf3c6Q9D8P7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c6Q9D8P7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c6Q9D8P7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c6Q9D8P7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gtf3c6Q9D8P7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf3c6Q9D8P7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf3c6Q9D8P7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gtf3c6Q9D8P7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
Gtf3c6Q9D8P7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.78■□□□□ 0.92
Gtf3c6Q9D8P7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf3c6Q9D8P7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf3c6Q9D8P7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf3c6Q9D8P7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.78■□□□□ 0.92
Gtf3c6Q9D8P7 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.78■□□□□ 0.92
Gtf3c6Q9D8P7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.78■□□□□ 0.92
Gtf3c6Q9D8P7 Spcs1-204ENSMUST00000226782 949 ntBASIC20.78■□□□□ 0.92
Gtf3c6Q9D8P7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf3c6Q9D8P7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf3c6Q9D8P7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Gtf3c6Q9D8P7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.77■□□□□ 0.92
Gtf3c6Q9D8P7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf3c6Q9D8P7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf3c6Q9D8P7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf3c6Q9D8P7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf3c6Q9D8P7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf3c6Q9D8P7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf3c6Q9D8P7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf3c6Q9D8P7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Gtf3c6Q9D8P7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf3c6Q9D8P7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf3c6Q9D8P7 Gm43137-201ENSMUST00000198052 594 ntBASIC20.76■□□□□ 0.91
Gtf3c6Q9D8P7 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.76■□□□□ 0.91
Gtf3c6Q9D8P7 Serp2-204ENSMUST00000228055 705 ntBASIC20.76■□□□□ 0.91
Gtf3c6Q9D8P7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf3c6Q9D8P7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf3c6Q9D8P7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf3c6Q9D8P7 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.75■□□□□ 0.91
Gtf3c6Q9D8P7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.75■□□□□ 0.91
Gtf3c6Q9D8P7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.75■□□□□ 0.91
Gtf3c6Q9D8P7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Gtf3c6Q9D8P7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gtf3c6Q9D8P7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gtf3c6Q9D8P7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Gtf3c6Q9D8P7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gtf3c6Q9D8P7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gtf3c6Q9D8P7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf3c6Q9D8P7 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.74■□□□□ 0.91
Gtf3c6Q9D8P7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Gtf3c6Q9D8P7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf3c6Q9D8P7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Gtf3c6Q9D8P7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf3c6Q9D8P7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf3c6Q9D8P7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf3c6Q9D8P7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf3c6Q9D8P7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf3c6Q9D8P7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms