Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf225Q9D7D1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf225Q9D7D1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf225Q9D7D1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf225Q9D7D1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf225Q9D7D1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf225Q9D7D1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf225Q9D7D1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.52■□□□□ 0.88
Rnf225Q9D7D1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rnf225Q9D7D1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rnf225Q9D7D1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rnf225Q9D7D1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rnf225Q9D7D1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf225Q9D7D1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf225Q9D7D1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf225Q9D7D1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.51■□□□□ 0.87
Rnf225Q9D7D1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf225Q9D7D1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf225Q9D7D1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf225Q9D7D1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.51■□□□□ 0.87
Rnf225Q9D7D1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf225Q9D7D1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rnf225Q9D7D1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rnf225Q9D7D1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf225Q9D7D1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf225Q9D7D1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.5■□□□□ 0.87
Rnf225Q9D7D1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rnf225Q9D7D1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf225Q9D7D1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf225Q9D7D1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf225Q9D7D1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf225Q9D7D1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
Rnf225Q9D7D1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf225Q9D7D1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Rnf225Q9D7D1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf225Q9D7D1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf225Q9D7D1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf225Q9D7D1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Rnf225Q9D7D1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf225Q9D7D1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf225Q9D7D1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf225Q9D7D1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
Rnf225Q9D7D1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf225Q9D7D1 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.49■□□□□ 0.87
Rnf225Q9D7D1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf225Q9D7D1 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.48■□□□□ 0.87
Rnf225Q9D7D1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf225Q9D7D1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf225Q9D7D1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf225Q9D7D1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf225Q9D7D1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.48■□□□□ 0.87
Rnf225Q9D7D1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf225Q9D7D1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf225Q9D7D1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.48■□□□□ 0.87
Rnf225Q9D7D1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf225Q9D7D1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Rnf225Q9D7D1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf225Q9D7D1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf225Q9D7D1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf225Q9D7D1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf225Q9D7D1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rnf225Q9D7D1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf225Q9D7D1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf225Q9D7D1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf225Q9D7D1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf225Q9D7D1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf225Q9D7D1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf225Q9D7D1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf225Q9D7D1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf225Q9D7D1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf225Q9D7D1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf225Q9D7D1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf225Q9D7D1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rnf225Q9D7D1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf225Q9D7D1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf225Q9D7D1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf225Q9D7D1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf225Q9D7D1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf225Q9D7D1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rnf225Q9D7D1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf225Q9D7D1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf225Q9D7D1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf225Q9D7D1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rnf225Q9D7D1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rnf225Q9D7D1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf225Q9D7D1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf225Q9D7D1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf225Q9D7D1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rnf225Q9D7D1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Rnf225Q9D7D1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf225Q9D7D1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf225Q9D7D1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.44■□□□□ 0.86
Rnf225Q9D7D1 Gm27454-201ENSMUST00000185090 204 ntBASIC20.44■□□□□ 0.86
Rnf225Q9D7D1 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.44■□□□□ 0.86
Rnf225Q9D7D1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.44■□□□□ 0.86
Rnf225Q9D7D1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf225Q9D7D1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf225Q9D7D1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf225Q9D7D1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.43■□□□□ 0.86
Rnf225Q9D7D1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms