Protein–RNA interactions for Protein: Q9D620

Rab11fip1, Rab11 family-interacting protein 1, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip1Q9D620 Gm27454-201ENSMUST00000185090 204 ntBASIC20.77■□□□□ 0.92
Rab11fip1Q9D620 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.77■□□□□ 0.92
Rab11fip1Q9D620 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Rab11fip1Q9D620 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rab11fip1Q9D620 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab11fip1Q9D620 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab11fip1Q9D620 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.77■□□□□ 0.92
Rab11fip1Q9D620 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rab11fip1Q9D620 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.76■□□□□ 0.91
Rab11fip1Q9D620 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip1Q9D620 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Rab11fip1Q9D620 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip1Q9D620 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip1Q9D620 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.76■□□□□ 0.91
Rab11fip1Q9D620 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip1Q9D620 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.76■□□□□ 0.91
Rab11fip1Q9D620 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Rab11fip1Q9D620 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip1Q9D620 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip1Q9D620 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip1Q9D620 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip1Q9D620 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip1Q9D620 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip1Q9D620 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip1Q9D620 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.75■□□□□ 0.91
Rab11fip1Q9D620 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip1Q9D620 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip1Q9D620 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip1Q9D620 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip1Q9D620 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip1Q9D620 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip1Q9D620 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.74■□□□□ 0.91
Rab11fip1Q9D620 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip1Q9D620 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip1Q9D620 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip1Q9D620 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.74■□□□□ 0.91
Rab11fip1Q9D620 Mir7075-201ENSMUST00000184187 82 ntBASIC20.74■□□□□ 0.91
Rab11fip1Q9D620 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.74■□□□□ 0.91
Rab11fip1Q9D620 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip1Q9D620 Serp2-204ENSMUST00000228055 705 ntBASIC20.74■□□□□ 0.91
Rab11fip1Q9D620 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip1Q9D620 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
Rab11fip1Q9D620 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip1Q9D620 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
Rab11fip1Q9D620 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip1Q9D620 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rab11fip1Q9D620 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rab11fip1Q9D620 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip1Q9D620 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip1Q9D620 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip1Q9D620 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip1Q9D620 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Rab11fip1Q9D620 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip1Q9D620 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip1Q9D620 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip1Q9D620 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip1Q9D620 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Rab11fip1Q9D620 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip1Q9D620 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip1Q9D620 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Rab11fip1Q9D620 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rab11fip1Q9D620 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip1Q9D620 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip1Q9D620 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip1Q9D620 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rab11fip1Q9D620 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rab11fip1Q9D620 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.71■□□□□ 0.91
Rab11fip1Q9D620 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rab11fip1Q9D620 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rab11fip1Q9D620 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rab11fip1Q9D620 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip1Q9D620 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.7■□□□□ 0.9
Rab11fip1Q9D620 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip1Q9D620 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.7■□□□□ 0.9
Rab11fip1Q9D620 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip1Q9D620 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip1Q9D620 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip1Q9D620 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip1Q9D620 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.69■□□□□ 0.9
Rab11fip1Q9D620 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip1Q9D620 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Rab11fip1Q9D620 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip1Q9D620 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip1Q9D620 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip1Q9D620 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rab11fip1Q9D620 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip1Q9D620 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip1Q9D620 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip1Q9D620 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip1Q9D620 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.68■□□□□ 0.9
Rab11fip1Q9D620 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip1Q9D620 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip1Q9D620 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.68■□□□□ 0.9
Rab11fip1Q9D620 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Rab11fip1Q9D620 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.68■□□□□ 0.9
Rab11fip1Q9D620 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip1Q9D620 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip1Q9D620 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.68■□□□□ 0.9
Rab11fip1Q9D620 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip1Q9D620 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms