Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Upk1aQ9D132 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.58■□□□□ 0.56
Upk1aQ9D132 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.58■□□□□ 0.56
Upk1aQ9D132 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.58■□□□□ 0.56
Upk1aQ9D132 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Upk1aQ9D132 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Upk1aQ9D132 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Upk1aQ9D132 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Upk1aQ9D132 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1aQ9D132 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1aQ9D132 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1aQ9D132 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1aQ9D132 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.57■□□□□ 0.56
Upk1aQ9D132 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1aQ9D132 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1aQ9D132 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1aQ9D132 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Upk1aQ9D132 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1aQ9D132 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Upk1aQ9D132 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1aQ9D132 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1aQ9D132 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upk1aQ9D132 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Upk1aQ9D132 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upk1aQ9D132 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upk1aQ9D132 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upk1aQ9D132 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upk1aQ9D132 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upk1aQ9D132 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.56■□□□□ 0.56
Upk1aQ9D132 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
Upk1aQ9D132 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.56■□□□□ 0.56
Upk1aQ9D132 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.56■□□□□ 0.56
Upk1aQ9D132 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upk1aQ9D132 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.56■□□□□ 0.56
Upk1aQ9D132 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Upk1aQ9D132 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk1aQ9D132 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Upk1aQ9D132 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.55■□□□□ 0.56
Upk1aQ9D132 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.55■□□□□ 0.56
Upk1aQ9D132 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.55■□□□□ 0.56
Upk1aQ9D132 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Upk1aQ9D132 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.55■□□□□ 0.56
Upk1aQ9D132 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk1aQ9D132 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk1aQ9D132 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk1aQ9D132 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk1aQ9D132 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Upk1aQ9D132 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upk1aQ9D132 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upk1aQ9D132 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.54■□□□□ 0.56
Upk1aQ9D132 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.54■□□□□ 0.56
Upk1aQ9D132 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.54■□□□□ 0.56
Upk1aQ9D132 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Upk1aQ9D132 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.54■□□□□ 0.56
Upk1aQ9D132 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.54■□□□□ 0.56
Upk1aQ9D132 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upk1aQ9D132 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upk1aQ9D132 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upk1aQ9D132 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Upk1aQ9D132 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Upk1aQ9D132 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Upk1aQ9D132 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upk1aQ9D132 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Upk1aQ9D132 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upk1aQ9D132 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upk1aQ9D132 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upk1aQ9D132 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upk1aQ9D132 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Upk1aQ9D132 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.53■□□□□ 0.56
Upk1aQ9D132 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Upk1aQ9D132 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.52■□□□□ 0.56
Upk1aQ9D132 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Upk1aQ9D132 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Upk1aQ9D132 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Upk1aQ9D132 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Upk1aQ9D132 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Upk1aQ9D132 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Upk1aQ9D132 Rarb-207ENSMUST00000225921 2756 ntBASIC18.52■□□□□ 0.55
Upk1aQ9D132 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Upk1aQ9D132 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upk1aQ9D132 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Upk1aQ9D132 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Upk1aQ9D132 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upk1aQ9D132 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upk1aQ9D132 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.51■□□□□ 0.55
Upk1aQ9D132 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.51■□□□□ 0.55
Upk1aQ9D132 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.51■□□□□ 0.55
Upk1aQ9D132 Gm40881-201ENSMUST00000223397 166 ntBASIC18.51■□□□□ 0.55
Upk1aQ9D132 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upk1aQ9D132 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Upk1aQ9D132 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upk1aQ9D132 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upk1aQ9D132 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk1aQ9D132 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk1aQ9D132 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk1aQ9D132 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upk1aQ9D132 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Upk1aQ9D132 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Upk1aQ9D132 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.5■□□□□ 0.55
Upk1aQ9D132 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms