Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.35■■□□□ 1.01
Lysmd1Q9D0E3 Gm5867-201ENSMUST00000063197 592 ntBASIC21.35■■□□□ 1.01
Lysmd1Q9D0E3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lysmd1Q9D0E3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lysmd1Q9D0E3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Lysmd1Q9D0E3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lysmd1Q9D0E3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lysmd1Q9D0E3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.34■■□□□ 1.01
Lysmd1Q9D0E3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC21.34■■□□□ 1.01
Lysmd1Q9D0E3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lysmd1Q9D0E3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Lysmd1Q9D0E3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.33■■□□□ 1.01
Lysmd1Q9D0E3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Lysmd1Q9D0E3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
Lysmd1Q9D0E3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.33■■□□□ 1.01
Lysmd1Q9D0E3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.33■■□□□ 1.01
Lysmd1Q9D0E3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC21.33■■□□□ 1.01
Lysmd1Q9D0E3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lysmd1Q9D0E3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lysmd1Q9D0E3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lysmd1Q9D0E3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.33■■□□□ 1
Lysmd1Q9D0E3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.33■■□□□ 1
Lysmd1Q9D0E3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Lysmd1Q9D0E3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lysmd1Q9D0E3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lysmd1Q9D0E3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lysmd1Q9D0E3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lysmd1Q9D0E3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.32■■□□□ 1
Lysmd1Q9D0E3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lysmd1Q9D0E3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lysmd1Q9D0E3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lysmd1Q9D0E3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lysmd1Q9D0E3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lysmd1Q9D0E3 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.31■■□□□ 1
Lysmd1Q9D0E3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lysmd1Q9D0E3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lysmd1Q9D0E3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lysmd1Q9D0E3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lysmd1Q9D0E3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lysmd1Q9D0E3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lysmd1Q9D0E3 Gm9103-201ENSMUST00000119371 405 ntBASIC21.31■■□□□ 1
Lysmd1Q9D0E3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Lysmd1Q9D0E3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lysmd1Q9D0E3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.31■■□□□ 1
Lysmd1Q9D0E3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lysmd1Q9D0E3 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.3■■□□□ 1
Lysmd1Q9D0E3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Lysmd1Q9D0E3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Lysmd1Q9D0E3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.3■■□□□ 1
Lysmd1Q9D0E3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Lysmd1Q9D0E3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lysmd1Q9D0E3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lysmd1Q9D0E3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Lysmd1Q9D0E3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lysmd1Q9D0E3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lysmd1Q9D0E3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.29■■□□□ 1
Lysmd1Q9D0E3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Lysmd1Q9D0E3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lysmd1Q9D0E3 AC159205.3-201ENSMUST00000224614 874 ntBASIC21.29■■□□□ 1
Lysmd1Q9D0E3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Lysmd1Q9D0E3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lysmd1Q9D0E3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.29■■□□□ 1
Lysmd1Q9D0E3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lysmd1Q9D0E3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lysmd1Q9D0E3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lysmd1Q9D0E3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.28■■□□□ 1
Lysmd1Q9D0E3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lysmd1Q9D0E3 Gm7461-201ENSMUST00000058918 827 ntBASIC21.28■■□□□ 1
Lysmd1Q9D0E3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lysmd1Q9D0E3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.27■■□□□ 1
Lysmd1Q9D0E3 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.27■■□□□ 1
Lysmd1Q9D0E3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC21.27■■□□□ 1
Lysmd1Q9D0E3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lysmd1Q9D0E3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Lysmd1Q9D0E3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Lysmd1Q9D0E3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lysmd1Q9D0E3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.26■□□□□ 0.99
Lysmd1Q9D0E3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
Lysmd1Q9D0E3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lysmd1Q9D0E3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.26■□□□□ 0.99
Lysmd1Q9D0E3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lysmd1Q9D0E3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lysmd1Q9D0E3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lysmd1Q9D0E3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Lysmd1Q9D0E3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lysmd1Q9D0E3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Lysmd1Q9D0E3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.25■□□□□ 0.99
Lysmd1Q9D0E3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lysmd1Q9D0E3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lysmd1Q9D0E3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lysmd1Q9D0E3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Lysmd1Q9D0E3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lysmd1Q9D0E3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.24■□□□□ 0.99
Lysmd1Q9D0E3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Lysmd1Q9D0E3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.24■□□□□ 0.99
Lysmd1Q9D0E3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.24■□□□□ 0.99
Lysmd1Q9D0E3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lysmd1Q9D0E3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lysmd1Q9D0E3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lysmd1Q9D0E3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms