Protein–RNA interactions for Protein: Q9D035

Nkain1, Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkain1Q9D035 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkain1Q9D035 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nkain1Q9D035 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Nkain1Q9D035 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.23■□□□□ 0.51
Nkain1Q9D035 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nkain1Q9D035 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkain1Q9D035 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nkain1Q9D035 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.23■□□□□ 0.51
Nkain1Q9D035 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nkain1Q9D035 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Nkain1Q9D035 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Nkain1Q9D035 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nkain1Q9D035 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkain1Q9D035 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.22■□□□□ 0.51
Nkain1Q9D035 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Nkain1Q9D035 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nkain1Q9D035 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.22■□□□□ 0.51
Nkain1Q9D035 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.22■□□□□ 0.51
Nkain1Q9D035 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.22■□□□□ 0.51
Nkain1Q9D035 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.22■□□□□ 0.51
Nkain1Q9D035 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkain1Q9D035 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Nkain1Q9D035 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkain1Q9D035 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Nkain1Q9D035 AA386476-201ENSMUST00000098781 1665 ntBASIC18.22■□□□□ 0.51
Nkain1Q9D035 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkain1Q9D035 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkain1Q9D035 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkain1Q9D035 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.21■□□□□ 0.51
Nkain1Q9D035 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.21■□□□□ 0.51
Nkain1Q9D035 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkain1Q9D035 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkain1Q9D035 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkain1Q9D035 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkain1Q9D035 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Nkain1Q9D035 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkain1Q9D035 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Nkain1Q9D035 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkain1Q9D035 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Nkain1Q9D035 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkain1Q9D035 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkain1Q9D035 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Nkain1Q9D035 Reep4-203ENSMUST00000226563 1444 ntBASIC18.2■□□□□ 0.5
Nkain1Q9D035 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkain1Q9D035 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Nkain1Q9D035 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkain1Q9D035 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkain1Q9D035 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.2■□□□□ 0.5
Nkain1Q9D035 Gm13234-201ENSMUST00000120010 747 ntBASIC18.19■□□□□ 0.5
Nkain1Q9D035 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.19■□□□□ 0.5
Nkain1Q9D035 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.19■□□□□ 0.5
Nkain1Q9D035 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkain1Q9D035 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkain1Q9D035 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkain1Q9D035 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkain1Q9D035 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkain1Q9D035 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Nkain1Q9D035 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nkain1Q9D035 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkain1Q9D035 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.18■□□□□ 0.5
Nkain1Q9D035 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkain1Q9D035 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkain1Q9D035 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkain1Q9D035 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nkain1Q9D035 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkain1Q9D035 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkain1Q9D035 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkain1Q9D035 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkain1Q9D035 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.17■□□□□ 0.5
Nkain1Q9D035 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.17■□□□□ 0.5
Nkain1Q9D035 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.17■□□□□ 0.5
Nkain1Q9D035 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkain1Q9D035 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkain1Q9D035 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkain1Q9D035 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nkain1Q9D035 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nkain1Q9D035 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkain1Q9D035 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nkain1Q9D035 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkain1Q9D035 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkain1Q9D035 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.16■□□□□ 0.5
Nkain1Q9D035 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nkain1Q9D035 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nkain1Q9D035 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nkain1Q9D035 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nkain1Q9D035 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkain1Q9D035 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkain1Q9D035 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkain1Q9D035 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkain1Q9D035 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nkain1Q9D035 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Nkain1Q9D035 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.15■□□□□ 0.5
Nkain1Q9D035 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkain1Q9D035 Gm37179-201ENSMUST00000194862 823 ntBASIC18.15■□□□□ 0.5
Nkain1Q9D035 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkain1Q9D035 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Nkain1Q9D035 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkain1Q9D035 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nkain1Q9D035 Gm29257-201ENSMUST00000186115 639 ntBASIC18.14■□□□□ 0.49
Nkain1Q9D035 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms