Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ssbp3Q9D032 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ssbp3Q9D032 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ssbp3Q9D032 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Ssbp3Q9D032 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ssbp3Q9D032 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.22■□□□□ 0.19
Ssbp3Q9D032 Gm8495-201ENSMUST00000188740 694 ntBASIC16.22■□□□□ 0.19
Ssbp3Q9D032 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.22■□□□□ 0.19
Ssbp3Q9D032 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ssbp3Q9D032 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ssbp3Q9D032 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ssbp3Q9D032 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ssbp3Q9D032 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ssbp3Q9D032 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ssbp3Q9D032 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ssbp3Q9D032 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssbp3Q9D032 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssbp3Q9D032 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssbp3Q9D032 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssbp3Q9D032 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ssbp3Q9D032 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssbp3Q9D032 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssbp3Q9D032 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.21■□□□□ 0.19
Ssbp3Q9D032 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssbp3Q9D032 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Ssbp3Q9D032 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ssbp3Q9D032 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssbp3Q9D032 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ssbp3Q9D032 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ssbp3Q9D032 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssbp3Q9D032 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssbp3Q9D032 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.2■□□□□ 0.18
Ssbp3Q9D032 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssbp3Q9D032 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssbp3Q9D032 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssbp3Q9D032 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ssbp3Q9D032 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.2■□□□□ 0.18
Ssbp3Q9D032 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ssbp3Q9D032 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Gm5874-201ENSMUST00000096101 508 ntBASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Ssbp3Q9D032 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.18■□□□□ 0.18
Ssbp3Q9D032 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssbp3Q9D032 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssbp3Q9D032 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssbp3Q9D032 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ssbp3Q9D032 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.18■□□□□ 0.18
Ssbp3Q9D032 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ssbp3Q9D032 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.18■□□□□ 0.18
Ssbp3Q9D032 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ssbp3Q9D032 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ssbp3Q9D032 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.18■□□□□ 0.18
Ssbp3Q9D032 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssbp3Q9D032 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ssbp3Q9D032 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssbp3Q9D032 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.17■□□□□ 0.18
Ssbp3Q9D032 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Ssbp3Q9D032 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ssbp3Q9D032 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.17■□□□□ 0.18
Ssbp3Q9D032 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssbp3Q9D032 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ssbp3Q9D032 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssbp3Q9D032 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssbp3Q9D032 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ssbp3Q9D032 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssbp3Q9D032 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssbp3Q9D032 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ssbp3Q9D032 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ssbp3Q9D032 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssbp3Q9D032 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.16■□□□□ 0.18
Ssbp3Q9D032 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ssbp3Q9D032 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ssbp3Q9D032 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Ssbp3Q9D032 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.16■□□□□ 0.18
Ssbp3Q9D032 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.16■□□□□ 0.18
Ssbp3Q9D032 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ssbp3Q9D032 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssbp3Q9D032 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssbp3Q9D032 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssbp3Q9D032 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssbp3Q9D032 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssbp3Q9D032 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ssbp3Q9D032 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssbp3Q9D032 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms