Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.16■□□□□ 0.34
Raet1eQ9CZQ6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Raet1eQ9CZQ6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Raet1eQ9CZQ6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Raet1eQ9CZQ6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Raet1eQ9CZQ6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Raet1eQ9CZQ6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Raet1eQ9CZQ6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Raet1eQ9CZQ6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1eQ9CZQ6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1eQ9CZQ6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1eQ9CZQ6 Gm7143-201ENSMUST00000222811 859 ntBASIC17.15■□□□□ 0.34
Raet1eQ9CZQ6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1eQ9CZQ6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1eQ9CZQ6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1eQ9CZQ6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1eQ9CZQ6 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.15■□□□□ 0.34
Raet1eQ9CZQ6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1eQ9CZQ6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1eQ9CZQ6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.15■□□□□ 0.34
Raet1eQ9CZQ6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1eQ9CZQ6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1eQ9CZQ6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1eQ9CZQ6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1eQ9CZQ6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1eQ9CZQ6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Raet1eQ9CZQ6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1eQ9CZQ6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Raet1eQ9CZQ6 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.14■□□□□ 0.33
Raet1eQ9CZQ6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1eQ9CZQ6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1eQ9CZQ6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1eQ9CZQ6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1eQ9CZQ6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1eQ9CZQ6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1eQ9CZQ6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1eQ9CZQ6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1eQ9CZQ6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1eQ9CZQ6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Raet1eQ9CZQ6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1eQ9CZQ6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.13■□□□□ 0.33
Raet1eQ9CZQ6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Raet1eQ9CZQ6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1eQ9CZQ6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1eQ9CZQ6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1eQ9CZQ6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1eQ9CZQ6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1eQ9CZQ6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Raet1eQ9CZQ6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1eQ9CZQ6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Raet1eQ9CZQ6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1eQ9CZQ6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1eQ9CZQ6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1eQ9CZQ6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1eQ9CZQ6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Raet1eQ9CZQ6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1eQ9CZQ6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1eQ9CZQ6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Raet1eQ9CZQ6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.12■□□□□ 0.33
Raet1eQ9CZQ6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.12■□□□□ 0.33
Raet1eQ9CZQ6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1eQ9CZQ6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1eQ9CZQ6 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.1■□□□□ 0.33
Raet1eQ9CZQ6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1eQ9CZQ6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Raet1eQ9CZQ6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1eQ9CZQ6 Gm10420-201ENSMUST00000121713 882 ntBASIC17.1■□□□□ 0.33
Raet1eQ9CZQ6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.1■□□□□ 0.33
Raet1eQ9CZQ6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1eQ9CZQ6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1eQ9CZQ6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1eQ9CZQ6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1eQ9CZQ6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1eQ9CZQ6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1eQ9CZQ6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1eQ9CZQ6 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.09■□□□□ 0.33
Raet1eQ9CZQ6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.09■□□□□ 0.33
Raet1eQ9CZQ6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1eQ9CZQ6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Raet1eQ9CZQ6 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.09■□□□□ 0.33
Raet1eQ9CZQ6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms