Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snf8Q9CZ28 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.07■□□□□ 0.8
Snf8Q9CZ28 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snf8Q9CZ28 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Snf8Q9CZ28 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.07■□□□□ 0.8
Snf8Q9CZ28 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.07■□□□□ 0.8
Snf8Q9CZ28 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Snf8Q9CZ28 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Snf8Q9CZ28 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snf8Q9CZ28 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snf8Q9CZ28 Golph3-205ENSMUST00000228671 2842 ntBASIC20.07■□□□□ 0.8
Snf8Q9CZ28 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snf8Q9CZ28 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snf8Q9CZ28 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.07■□□□□ 0.8
Snf8Q9CZ28 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snf8Q9CZ28 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snf8Q9CZ28 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snf8Q9CZ28 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snf8Q9CZ28 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.06■□□□□ 0.8
Snf8Q9CZ28 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snf8Q9CZ28 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Snf8Q9CZ28 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Snf8Q9CZ28 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.06■□□□□ 0.8
Snf8Q9CZ28 Etf1-202ENSMUST00000180351 108 ntBASIC20.06■□□□□ 0.8
Snf8Q9CZ28 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.06■□□□□ 0.8
Snf8Q9CZ28 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.06■□□□□ 0.8
Snf8Q9CZ28 Gm15820-201ENSMUST00000201566 728 ntBASIC20.06■□□□□ 0.8
Snf8Q9CZ28 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Snf8Q9CZ28 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snf8Q9CZ28 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snf8Q9CZ28 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snf8Q9CZ28 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Snf8Q9CZ28 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.05■□□□□ 0.8
Snf8Q9CZ28 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snf8Q9CZ28 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.05■□□□□ 0.8
Snf8Q9CZ28 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.05■□□□□ 0.8
Snf8Q9CZ28 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.05■□□□□ 0.8
Snf8Q9CZ28 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.05■□□□□ 0.8
Snf8Q9CZ28 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snf8Q9CZ28 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snf8Q9CZ28 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snf8Q9CZ28 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snf8Q9CZ28 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Snf8Q9CZ28 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Snf8Q9CZ28 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.04■□□□□ 0.8
Snf8Q9CZ28 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Snf8Q9CZ28 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Snf8Q9CZ28 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Snf8Q9CZ28 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Snf8Q9CZ28 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
Snf8Q9CZ28 Gm15546-201ENSMUST00000122095 826 ntBASIC20.04■□□□□ 0.8
Snf8Q9CZ28 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Snf8Q9CZ28 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.04■□□□□ 0.8
Snf8Q9CZ28 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Snf8Q9CZ28 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Snf8Q9CZ28 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Snf8Q9CZ28 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snf8Q9CZ28 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.03■□□□□ 0.8
Snf8Q9CZ28 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snf8Q9CZ28 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snf8Q9CZ28 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Snf8Q9CZ28 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Snf8Q9CZ28 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snf8Q9CZ28 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snf8Q9CZ28 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snf8Q9CZ28 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snf8Q9CZ28 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Snf8Q9CZ28 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Snf8Q9CZ28 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Snf8Q9CZ28 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Snf8Q9CZ28 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Snf8Q9CZ28 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Snf8Q9CZ28 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Snf8Q9CZ28 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.02■□□□□ 0.8
Snf8Q9CZ28 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Snf8Q9CZ28 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.02■□□□□ 0.8
Snf8Q9CZ28 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Snf8Q9CZ28 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Snf8Q9CZ28 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Snf8Q9CZ28 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Snf8Q9CZ28 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Snf8Q9CZ28 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Snf8Q9CZ28 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Snf8Q9CZ28 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Snf8Q9CZ28 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Snf8Q9CZ28 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Snf8Q9CZ28 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Snf8Q9CZ28 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.01■□□□□ 0.79
Snf8Q9CZ28 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Snf8Q9CZ28 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Snf8Q9CZ28 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Snf8Q9CZ28 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Snf8Q9CZ28 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.01■□□□□ 0.79
Snf8Q9CZ28 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Snf8Q9CZ28 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Snf8Q9CZ28 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Snf8Q9CZ28 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20■□□□□ 0.79
Snf8Q9CZ28 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20■□□□□ 0.79
Snf8Q9CZ28 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20■□□□□ 0.79
Snf8Q9CZ28 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms