Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.62■■□□□ 1.05
Q9CYI0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Q9CYI0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Q9CYI0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Q9CYI0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Q9CYI0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Q9CYI0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Q9CYI0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Q9CYI0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.61■■□□□ 1.05
Q9CYI0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Q9CYI0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Q9CYI0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Q9CYI0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Q9CYI0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Q9CYI0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Q9CYI0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Q9CYI0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Q9CYI0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.6■■□□□ 1.05
Q9CYI0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Q9CYI0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Q9CYI0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Q9CYI0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Q9CYI0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Q9CYI0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Q9CYI0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Q9CYI0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Q9CYI0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Q9CYI0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.59■■□□□ 1.05
Q9CYI0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.59■■□□□ 1.05
Q9CYI0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.59■■□□□ 1.05
Q9CYI0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Q9CYI0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Q9CYI0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Q9CYI0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Q9CYI0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Q9CYI0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Q9CYI0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Q9CYI0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Q9CYI0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Q9CYI0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Q9CYI0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Q9CYI0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.58■■□□□ 1.05
Q9CYI0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.58■■□□□ 1.05
Q9CYI0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.58■■□□□ 1.05
Q9CYI0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Q9CYI0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Q9CYI0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Q9CYI0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Q9CYI0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Q9CYI0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Q9CYI0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Q9CYI0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.57■■□□□ 1.04
Q9CYI0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Q9CYI0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Q9CYI0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Q9CYI0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.57■■□□□ 1.04
Q9CYI0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Q9CYI0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Q9CYI0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Q9CYI0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Q9CYI0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Q9CYI0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Q9CYI0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Q9CYI0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.56■■□□□ 1.04
Q9CYI0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Q9CYI0 Gm10033-202ENSMUST00000211874 928 ntBASIC21.56■■□□□ 1.04
Q9CYI0 Gm18671-201ENSMUST00000214826 683 ntBASIC21.56■■□□□ 1.04
Q9CYI0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Q9CYI0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Q9CYI0 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.56■■□□□ 1.04
Q9CYI0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Q9CYI0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Q9CYI0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Q9CYI0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Q9CYI0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Q9CYI0 Gm42778-201ENSMUST00000199644 553 ntBASIC21.55■■□□□ 1.04
Q9CYI0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Q9CYI0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Q9CYI0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Q9CYI0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Q9CYI0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Q9CYI0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
Q9CYI0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Q9CYI0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.54■■□□□ 1.04
Q9CYI0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Q9CYI0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Q9CYI0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Q9CYI0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.54■■□□□ 1.04
Q9CYI0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Q9CYI0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Q9CYI0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.54■■□□□ 1.04
Q9CYI0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Q9CYI0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
Q9CYI0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Q9CYI0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Q9CYI0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Q9CYI0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Q9CYI0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Q9CYI0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.53■■□□□ 1.04
Q9CYI0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms