Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cldnd1Q9CQX5 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.16■□□□□ 0.82
Cldnd1Q9CQX5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cldnd1Q9CQX5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cldnd1Q9CQX5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldnd1Q9CQX5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldnd1Q9CQX5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.15■□□□□ 0.82
Cldnd1Q9CQX5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.15■□□□□ 0.82
Cldnd1Q9CQX5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldnd1Q9CQX5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cldnd1Q9CQX5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cldnd1Q9CQX5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldnd1Q9CQX5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldnd1Q9CQX5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldnd1Q9CQX5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldnd1Q9CQX5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldnd1Q9CQX5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Cldnd1Q9CQX5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cldnd1Q9CQX5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cldnd1Q9CQX5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cldnd1Q9CQX5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cldnd1Q9CQX5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.14■□□□□ 0.81
Cldnd1Q9CQX5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cldnd1Q9CQX5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cldnd1Q9CQX5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cldnd1Q9CQX5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cldnd1Q9CQX5 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.14■□□□□ 0.81
Cldnd1Q9CQX5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cldnd1Q9CQX5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cldnd1Q9CQX5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cldnd1Q9CQX5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
Cldnd1Q9CQX5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cldnd1Q9CQX5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.13■□□□□ 0.81
Cldnd1Q9CQX5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cldnd1Q9CQX5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cldnd1Q9CQX5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.13■□□□□ 0.81
Cldnd1Q9CQX5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.13■□□□□ 0.81
Cldnd1Q9CQX5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.13■□□□□ 0.81
Cldnd1Q9CQX5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cldnd1Q9CQX5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cldnd1Q9CQX5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cldnd1Q9CQX5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.12■□□□□ 0.81
Cldnd1Q9CQX5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldnd1Q9CQX5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldnd1Q9CQX5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldnd1Q9CQX5 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldnd1Q9CQX5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cldnd1Q9CQX5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.11■□□□□ 0.81
Cldnd1Q9CQX5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cldnd1Q9CQX5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldnd1Q9CQX5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldnd1Q9CQX5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cldnd1Q9CQX5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldnd1Q9CQX5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cldnd1Q9CQX5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldnd1Q9CQX5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldnd1Q9CQX5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cldnd1Q9CQX5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldnd1Q9CQX5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cldnd1Q9CQX5 Gm26524-201ENSMUST00000192339 390 ntBASIC20.1■□□□□ 0.81
Cldnd1Q9CQX5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldnd1Q9CQX5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldnd1Q9CQX5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cldnd1Q9CQX5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldnd1Q9CQX5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldnd1Q9CQX5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldnd1Q9CQX5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldnd1Q9CQX5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cldnd1Q9CQX5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldnd1Q9CQX5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cldnd1Q9CQX5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldnd1Q9CQX5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cldnd1Q9CQX5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldnd1Q9CQX5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.09■□□□□ 0.81
Cldnd1Q9CQX5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldnd1Q9CQX5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldnd1Q9CQX5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldnd1Q9CQX5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldnd1Q9CQX5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Cldnd1Q9CQX5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cldnd1Q9CQX5 Gm13836-201ENSMUST00000121159 501 ntBASIC20.08■□□□□ 0.81
Cldnd1Q9CQX5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cldnd1Q9CQX5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cldnd1Q9CQX5 Rab3c-203ENSMUST00000224180 967 ntBASIC20.08■□□□□ 0.81
Cldnd1Q9CQX5 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldnd1Q9CQX5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldnd1Q9CQX5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cldnd1Q9CQX5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.07■□□□□ 0.8
Cldnd1Q9CQX5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.07■□□□□ 0.8
Cldnd1Q9CQX5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.07■□□□□ 0.8
Cldnd1Q9CQX5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldnd1Q9CQX5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Cldnd1Q9CQX5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldnd1Q9CQX5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldnd1Q9CQX5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.06■□□□□ 0.8
Cldnd1Q9CQX5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldnd1Q9CQX5 Gm27275-201ENSMUST00000184318 272 ntBASIC20.06■□□□□ 0.8
Cldnd1Q9CQX5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldnd1Q9CQX5 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldnd1Q9CQX5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms