Protein–RNA interactions for Protein: Q9CQC8

Spg21, Maspardin, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg21Q9CQC8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Spg21Q9CQC8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Spg21Q9CQC8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.53■□□□□ 0.88
Spg21Q9CQC8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Spg21Q9CQC8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.53■□□□□ 0.88
Spg21Q9CQC8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Spg21Q9CQC8 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.53■□□□□ 0.88
Spg21Q9CQC8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Spg21Q9CQC8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Spg21Q9CQC8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.52■□□□□ 0.88
Spg21Q9CQC8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Spg21Q9CQC8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.52■□□□□ 0.88
Spg21Q9CQC8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.52■□□□□ 0.88
Spg21Q9CQC8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.52■□□□□ 0.88
Spg21Q9CQC8 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.52■□□□□ 0.88
Spg21Q9CQC8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Spg21Q9CQC8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Spg21Q9CQC8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Spg21Q9CQC8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Spg21Q9CQC8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Spg21Q9CQC8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Spg21Q9CQC8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Spg21Q9CQC8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Spg21Q9CQC8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Spg21Q9CQC8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg21Q9CQC8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg21Q9CQC8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg21Q9CQC8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Spg21Q9CQC8 Gm7290-201ENSMUST00000104990 617 ntBASIC20.51■□□□□ 0.87
Spg21Q9CQC8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.51■□□□□ 0.87
Spg21Q9CQC8 Gm12918-201ENSMUST00000120234 636 ntBASIC20.51■□□□□ 0.87
Spg21Q9CQC8 Gm15710-201ENSMUST00000121821 636 ntBASIC20.51■□□□□ 0.87
Spg21Q9CQC8 Gm10653-202ENSMUST00000139570 835 ntBASIC20.51■□□□□ 0.87
Spg21Q9CQC8 Gm5075-201ENSMUST00000196916 622 ntBASIC20.51■□□□□ 0.87
Spg21Q9CQC8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.51■□□□□ 0.87
Spg21Q9CQC8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.51■□□□□ 0.87
Spg21Q9CQC8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.51■□□□□ 0.87
Spg21Q9CQC8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg21Q9CQC8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg21Q9CQC8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg21Q9CQC8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg21Q9CQC8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Spg21Q9CQC8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg21Q9CQC8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg21Q9CQC8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Spg21Q9CQC8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Spg21Q9CQC8 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.5■□□□□ 0.87
Spg21Q9CQC8 Gm6365-201ENSMUST00000054711 744 ntBASIC20.5■□□□□ 0.87
Spg21Q9CQC8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg21Q9CQC8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg21Q9CQC8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Spg21Q9CQC8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Spg21Q9CQC8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.5■□□□□ 0.87
Spg21Q9CQC8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Spg21Q9CQC8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg21Q9CQC8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg21Q9CQC8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Spg21Q9CQC8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.49■□□□□ 0.87
Spg21Q9CQC8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Spg21Q9CQC8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.49■□□□□ 0.87
Spg21Q9CQC8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Spg21Q9CQC8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Spg21Q9CQC8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Spg21Q9CQC8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Spg21Q9CQC8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Spg21Q9CQC8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Spg21Q9CQC8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Spg21Q9CQC8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Spg21Q9CQC8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Spg21Q9CQC8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Spg21Q9CQC8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Spg21Q9CQC8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Spg21Q9CQC8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Spg21Q9CQC8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Spg21Q9CQC8 AA386476-201ENSMUST00000098781 1665 ntBASIC20.48■□□□□ 0.87
Spg21Q9CQC8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Spg21Q9CQC8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Spg21Q9CQC8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Spg21Q9CQC8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.47■□□□□ 0.87
Spg21Q9CQC8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Spg21Q9CQC8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Spg21Q9CQC8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Spg21Q9CQC8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.47■□□□□ 0.87
Spg21Q9CQC8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Spg21Q9CQC8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
Spg21Q9CQC8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Spg21Q9CQC8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Spg21Q9CQC8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Spg21Q9CQC8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Spg21Q9CQC8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg21Q9CQC8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg21Q9CQC8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg21Q9CQC8 Gm13148-201ENSMUST00000118892 745 ntBASIC20.46■□□□□ 0.87
Spg21Q9CQC8 Gm6420-201ENSMUST00000193885 723 ntBASIC20.46■□□□□ 0.87
Spg21Q9CQC8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg21Q9CQC8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Spg21Q9CQC8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
Spg21Q9CQC8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Spg21Q9CQC8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.45■□□□□ 0.86
Spg21Q9CQC8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms