Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trim34aQ99PP6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
Trim34aQ99PP6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trim34aQ99PP6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trim34aQ99PP6 Dmtn-209ENSMUST00000228295 2572 ntBASIC24.22■■□□□ 1.47
Trim34aQ99PP6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim34aQ99PP6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim34aQ99PP6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim34aQ99PP6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC24.22■■□□□ 1.47
Trim34aQ99PP6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Trim34aQ99PP6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim34aQ99PP6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
Trim34aQ99PP6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Trim34aQ99PP6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim34aQ99PP6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim34aQ99PP6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim34aQ99PP6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim34aQ99PP6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Trim34aQ99PP6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Trim34aQ99PP6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Trim34aQ99PP6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Trim34aQ99PP6 Gm38205-201ENSMUST00000192243 258 ntBASIC24.21■■□□□ 1.47
Trim34aQ99PP6 AC154266.1-201ENSMUST00000223190 503 ntBASIC24.21■■□□□ 1.47
Trim34aQ99PP6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Trim34aQ99PP6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Trim34aQ99PP6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Trim34aQ99PP6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Trim34aQ99PP6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC24.2■■□□□ 1.46
Trim34aQ99PP6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC24.2■■□□□ 1.46
Trim34aQ99PP6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Trim34aQ99PP6 AA386476-201ENSMUST00000098781 1665 ntBASIC24.2■■□□□ 1.46
Trim34aQ99PP6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Trim34aQ99PP6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Trim34aQ99PP6 Gm15043-201ENSMUST00000118843 1543 ntBASIC24.2■■□□□ 1.46
Trim34aQ99PP6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Trim34aQ99PP6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trim34aQ99PP6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trim34aQ99PP6 Gm12441-201ENSMUST00000121806 588 ntBASIC24.19■■□□□ 1.46
Trim34aQ99PP6 CT010467.1-202ENSMUST00000205406 714 ntBASIC24.19■■□□□ 1.46
Trim34aQ99PP6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC24.19■■□□□ 1.46
Trim34aQ99PP6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Trim34aQ99PP6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trim34aQ99PP6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trim34aQ99PP6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Trim34aQ99PP6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC24.18■■□□□ 1.46
Trim34aQ99PP6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim34aQ99PP6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim34aQ99PP6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim34aQ99PP6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Trim34aQ99PP6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC24.18■■□□□ 1.46
Trim34aQ99PP6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Trim34aQ99PP6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC24.18■■□□□ 1.46
Trim34aQ99PP6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC24.18■■□□□ 1.46
Trim34aQ99PP6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim34aQ99PP6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim34aQ99PP6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim34aQ99PP6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim34aQ99PP6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC24.17■■□□□ 1.46
Trim34aQ99PP6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trim34aQ99PP6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Trim34aQ99PP6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
Trim34aQ99PP6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Trim34aQ99PP6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Trim34aQ99PP6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Trim34aQ99PP6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Trim34aQ99PP6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
Trim34aQ99PP6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC24.16■■□□□ 1.46
Trim34aQ99PP6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Trim34aQ99PP6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
Trim34aQ99PP6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC24.16■■□□□ 1.46
Trim34aQ99PP6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Trim34aQ99PP6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Trim34aQ99PP6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC24.16■■□□□ 1.46
Trim34aQ99PP6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Trim34aQ99PP6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Trim34aQ99PP6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Trim34aQ99PP6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Trim34aQ99PP6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Trim34aQ99PP6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
Trim34aQ99PP6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Trim34aQ99PP6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC24.14■■□□□ 1.45
Trim34aQ99PP6 Gm3807-201ENSMUST00000193520 1168 ntBASIC24.14■■□□□ 1.45
Trim34aQ99PP6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC24.14■■□□□ 1.45
Trim34aQ99PP6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Trim34aQ99PP6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Trim34aQ99PP6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
Trim34aQ99PP6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Trim34aQ99PP6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Trim34aQ99PP6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trim34aQ99PP6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trim34aQ99PP6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trim34aQ99PP6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trim34aQ99PP6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trim34aQ99PP6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Trim34aQ99PP6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC24.13■■□□□ 1.45
Trim34aQ99PP6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trim34aQ99PP6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Trim34aQ99PP6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trim34aQ99PP6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
Trim34aQ99PP6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC24.12■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms