Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lysmd3Q99LE3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lysmd3Q99LE3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lysmd3Q99LE3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lysmd3Q99LE3 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.32■□□□□ 0.84
Lysmd3Q99LE3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.32■□□□□ 0.84
Lysmd3Q99LE3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.32■□□□□ 0.84
Lysmd3Q99LE3 Gm10493-201ENSMUST00000097270 612 ntBASIC20.32■□□□□ 0.84
Lysmd3Q99LE3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lysmd3Q99LE3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lysmd3Q99LE3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lysmd3Q99LE3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lysmd3Q99LE3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lysmd3Q99LE3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lysmd3Q99LE3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lysmd3Q99LE3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lysmd3Q99LE3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.31■□□□□ 0.84
Lysmd3Q99LE3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Lysmd3Q99LE3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lysmd3Q99LE3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.31■□□□□ 0.84
Lysmd3Q99LE3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lysmd3Q99LE3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lysmd3Q99LE3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lysmd3Q99LE3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Lysmd3Q99LE3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lysmd3Q99LE3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Lysmd3Q99LE3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lysmd3Q99LE3 Iqck-206ENSMUST00000208658 2891 ntBASIC20.3■□□□□ 0.84
Lysmd3Q99LE3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Lysmd3Q99LE3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.3■□□□□ 0.84
Lysmd3Q99LE3 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.29■□□□□ 0.84
Lysmd3Q99LE3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd3Q99LE3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd3Q99LE3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd3Q99LE3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.29■□□□□ 0.84
Lysmd3Q99LE3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
Lysmd3Q99LE3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd3Q99LE3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd3Q99LE3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd3Q99LE3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.28■□□□□ 0.84
Lysmd3Q99LE3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lysmd3Q99LE3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.28■□□□□ 0.84
Lysmd3Q99LE3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lysmd3Q99LE3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.28■□□□□ 0.84
Lysmd3Q99LE3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.28■□□□□ 0.84
Lysmd3Q99LE3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lysmd3Q99LE3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lysmd3Q99LE3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lysmd3Q99LE3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lysmd3Q99LE3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lysmd3Q99LE3 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.27■□□□□ 0.84
Lysmd3Q99LE3 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.27■□□□□ 0.84
Lysmd3Q99LE3 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.27■□□□□ 0.84
Lysmd3Q99LE3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lysmd3Q99LE3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lysmd3Q99LE3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.27■□□□□ 0.84
Lysmd3Q99LE3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Lysmd3Q99LE3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Lysmd3Q99LE3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Lysmd3Q99LE3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lysmd3Q99LE3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Lysmd3Q99LE3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lysmd3Q99LE3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lysmd3Q99LE3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lysmd3Q99LE3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lysmd3Q99LE3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lysmd3Q99LE3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lysmd3Q99LE3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lysmd3Q99LE3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lysmd3Q99LE3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.25■□□□□ 0.83
Lysmd3Q99LE3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lysmd3Q99LE3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lysmd3Q99LE3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Lysmd3Q99LE3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd3Q99LE3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd3Q99LE3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd3Q99LE3 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.24■□□□□ 0.83
Lysmd3Q99LE3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Lysmd3Q99LE3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd3Q99LE3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd3Q99LE3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd3Q99LE3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd3Q99LE3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd3Q99LE3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd3Q99LE3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd3Q99LE3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Lysmd3Q99LE3 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.24■□□□□ 0.83
Lysmd3Q99LE3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd3Q99LE3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lysmd3Q99LE3 AA386476-201ENSMUST00000098781 1665 ntBASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 Gm27801-201ENSMUST00000184174 223 ntBASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms