Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha1Q91Y21 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdha1Q91Y21 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Pcdha1Q91Y21 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha1Q91Y21 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha1Q91Y21 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha1Q91Y21 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha1Q91Y21 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdha1Q91Y21 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.42■□□□□ 0.86
Pcdha1Q91Y21 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha1Q91Y21 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Pcdha1Q91Y21 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.42■□□□□ 0.86
Pcdha1Q91Y21 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.42■□□□□ 0.86
Pcdha1Q91Y21 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha1Q91Y21 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha1Q91Y21 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha1Q91Y21 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.41■□□□□ 0.86
Pcdha1Q91Y21 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha1Q91Y21 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha1Q91Y21 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha1Q91Y21 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha1Q91Y21 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha1Q91Y21 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Pcdha1Q91Y21 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha1Q91Y21 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pcdha1Q91Y21 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pcdha1Q91Y21 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha1Q91Y21 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha1Q91Y21 Gm10849-201ENSMUST00000100397 618 ntBASIC20.4■□□□□ 0.86
Pcdha1Q91Y21 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha1Q91Y21 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Pcdha1Q91Y21 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Pcdha1Q91Y21 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdha1Q91Y21 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha1Q91Y21 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha1Q91Y21 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Pcdha1Q91Y21 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.4■□□□□ 0.86
Pcdha1Q91Y21 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Pcdha1Q91Y21 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha1Q91Y21 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Pcdha1Q91Y21 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.39■□□□□ 0.86
Pcdha1Q91Y21 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdha1Q91Y21 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdha1Q91Y21 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdha1Q91Y21 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha1Q91Y21 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Pcdha1Q91Y21 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha1Q91Y21 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.39■□□□□ 0.85
Pcdha1Q91Y21 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha1Q91Y21 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha1Q91Y21 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha1Q91Y21 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha1Q91Y21 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha1Q91Y21 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha1Q91Y21 Gm7291-201ENSMUST00000199147 382 ntBASIC20.38■□□□□ 0.85
Pcdha1Q91Y21 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha1Q91Y21 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha1Q91Y21 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha1Q91Y21 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha1Q91Y21 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha1Q91Y21 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha1Q91Y21 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha1Q91Y21 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Pcdha1Q91Y21 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcdha1Q91Y21 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha1Q91Y21 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcdha1Q91Y21 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha1Q91Y21 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha1Q91Y21 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.36■□□□□ 0.85
Pcdha1Q91Y21 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha1Q91Y21 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha1Q91Y21 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha1Q91Y21 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha1Q91Y21 Gm42569-201ENSMUST00000200539 472 ntBASIC20.36■□□□□ 0.85
Pcdha1Q91Y21 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha1Q91Y21 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha1Q91Y21 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha1Q91Y21 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha1Q91Y21 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha1Q91Y21 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha1Q91Y21 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha1Q91Y21 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms