Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb20Q91XZ9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb20Q91XZ9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb20Q91XZ9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Pcdhb20Q91XZ9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdhb20Q91XZ9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.77■□□□□ 0.6
Pcdhb20Q91XZ9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb20Q91XZ9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb20Q91XZ9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdhb20Q91XZ9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.77■□□□□ 0.6
Pcdhb20Q91XZ9 Gm32390-201ENSMUST00000212713 1172 ntBASIC18.77■□□□□ 0.6
Pcdhb20Q91XZ9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb20Q91XZ9 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb20Q91XZ9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb20Q91XZ9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb20Q91XZ9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb20Q91XZ9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb20Q91XZ9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhb20Q91XZ9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb20Q91XZ9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.76■□□□□ 0.59
Pcdhb20Q91XZ9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.76■□□□□ 0.59
Pcdhb20Q91XZ9 Gm10493-201ENSMUST00000097270 612 ntBASIC18.76■□□□□ 0.59
Pcdhb20Q91XZ9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb20Q91XZ9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb20Q91XZ9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb20Q91XZ9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb20Q91XZ9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.75■□□□□ 0.59
Pcdhb20Q91XZ9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhb20Q91XZ9 Gm5874-201ENSMUST00000096101 508 ntBASIC18.75■□□□□ 0.59
Pcdhb20Q91XZ9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb20Q91XZ9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb20Q91XZ9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhb20Q91XZ9 AA386476-201ENSMUST00000098781 1665 ntBASIC18.74■□□□□ 0.59
Pcdhb20Q91XZ9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Pcdhb20Q91XZ9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhb20Q91XZ9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdhb20Q91XZ9 Gm37102-201ENSMUST00000195740 1105 ntBASIC18.74■□□□□ 0.59
Pcdhb20Q91XZ9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb20Q91XZ9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb20Q91XZ9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb20Q91XZ9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb20Q91XZ9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb20Q91XZ9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhb20Q91XZ9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb20Q91XZ9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb20Q91XZ9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb20Q91XZ9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb20Q91XZ9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Pcdhb20Q91XZ9 Gm27801-201ENSMUST00000184174 223 ntBASIC18.73■□□□□ 0.59
Pcdhb20Q91XZ9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb20Q91XZ9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb20Q91XZ9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb20Q91XZ9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb20Q91XZ9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb20Q91XZ9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb20Q91XZ9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb20Q91XZ9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb20Q91XZ9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb20Q91XZ9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb20Q91XZ9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb20Q91XZ9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb20Q91XZ9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb20Q91XZ9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb20Q91XZ9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb20Q91XZ9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb20Q91XZ9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb20Q91XZ9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb20Q91XZ9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb20Q91XZ9 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.71■□□□□ 0.59
Pcdhb20Q91XZ9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhb20Q91XZ9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb20Q91XZ9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb20Q91XZ9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb20Q91XZ9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb20Q91XZ9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb20Q91XZ9 Gm6754-201ENSMUST00000117124 913 ntBASIC18.71■□□□□ 0.59
Pcdhb20Q91XZ9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdhb20Q91XZ9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb20Q91XZ9 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC18.71■□□□□ 0.59
Pcdhb20Q91XZ9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb20Q91XZ9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb20Q91XZ9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb20Q91XZ9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb20Q91XZ9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb20Q91XZ9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb20Q91XZ9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb20Q91XZ9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb20Q91XZ9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb20Q91XZ9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb20Q91XZ9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb20Q91XZ9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb20Q91XZ9 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.7■□□□□ 0.58
Pcdhb20Q91XZ9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb20Q91XZ9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb20Q91XZ9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb20Q91XZ9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.69■□□□□ 0.58
Pcdhb20Q91XZ9 Gm28196-201ENSMUST00000187719 640 ntBASIC18.69■□□□□ 0.58
Pcdhb20Q91XZ9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb20Q91XZ9 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.69■□□□□ 0.58
Pcdhb20Q91XZ9 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms