Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhb3Q91XZ7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb3Q91XZ7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb3Q91XZ7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb3Q91XZ7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhb3Q91XZ7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb3Q91XZ7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.44■□□□□ 0.7
Pcdhb3Q91XZ7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb3Q91XZ7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb3Q91XZ7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb3Q91XZ7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb3Q91XZ7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb3Q91XZ7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb3Q91XZ7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.44■□□□□ 0.7
Pcdhb3Q91XZ7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhb3Q91XZ7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb3Q91XZ7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb3Q91XZ7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb3Q91XZ7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.43■□□□□ 0.7
Pcdhb3Q91XZ7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Pcdhb3Q91XZ7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb3Q91XZ7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb3Q91XZ7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb3Q91XZ7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhb3Q91XZ7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb3Q91XZ7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb3Q91XZ7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcdhb3Q91XZ7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb3Q91XZ7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdhb3Q91XZ7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb3Q91XZ7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.42■□□□□ 0.7
Pcdhb3Q91XZ7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb3Q91XZ7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb3Q91XZ7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhb3Q91XZ7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb3Q91XZ7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb3Q91XZ7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb3Q91XZ7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb3Q91XZ7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb3Q91XZ7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb3Q91XZ7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb3Q91XZ7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb3Q91XZ7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb3Q91XZ7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb3Q91XZ7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb3Q91XZ7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb3Q91XZ7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb3Q91XZ7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb3Q91XZ7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb3Q91XZ7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb3Q91XZ7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb3Q91XZ7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.4■□□□□ 0.7
Pcdhb3Q91XZ7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.4■□□□□ 0.7
Pcdhb3Q91XZ7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb3Q91XZ7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb3Q91XZ7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.4■□□□□ 0.7
Pcdhb3Q91XZ7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb3Q91XZ7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb3Q91XZ7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb3Q91XZ7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb3Q91XZ7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb3Q91XZ7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.39■□□□□ 0.69
Pcdhb3Q91XZ7 Gm7417-201ENSMUST00000192950 473 ntBASIC19.39■□□□□ 0.69
Pcdhb3Q91XZ7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.39■□□□□ 0.69
Pcdhb3Q91XZ7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb3Q91XZ7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb3Q91XZ7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhb3Q91XZ7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhb3Q91XZ7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb3Q91XZ7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb3Q91XZ7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhb3Q91XZ7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcdhb3Q91XZ7 Gm10399-202ENSMUST00000202768 748 ntBASIC19.38■□□□□ 0.69
Pcdhb3Q91XZ7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb3Q91XZ7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Pcdhb3Q91XZ7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb3Q91XZ7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb3Q91XZ7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb3Q91XZ7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb3Q91XZ7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb3Q91XZ7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb3Q91XZ7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb3Q91XZ7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb3Q91XZ7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb3Q91XZ7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdhb3Q91XZ7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb3Q91XZ7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb3Q91XZ7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.37■□□□□ 0.69
Pcdhb3Q91XZ7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdhb3Q91XZ7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdhb3Q91XZ7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb3Q91XZ7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb3Q91XZ7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb3Q91XZ7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb3Q91XZ7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb3Q91XZ7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb3Q91XZ7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.36■□□□□ 0.69
Pcdhb3Q91XZ7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb3Q91XZ7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.36■□□□□ 0.69
Pcdhb3Q91XZ7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms