Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb4Q91XZ6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb4Q91XZ6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb4Q91XZ6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb4Q91XZ6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdhb4Q91XZ6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.35■□□□□ 0.69
Pcdhb4Q91XZ6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb4Q91XZ6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb4Q91XZ6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb4Q91XZ6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
Pcdhb4Q91XZ6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb4Q91XZ6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb4Q91XZ6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb4Q91XZ6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb4Q91XZ6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb4Q91XZ6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb4Q91XZ6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb4Q91XZ6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb4Q91XZ6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.33■□□□□ 0.68
Pcdhb4Q91XZ6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb4Q91XZ6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhb4Q91XZ6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb4Q91XZ6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb4Q91XZ6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb4Q91XZ6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb4Q91XZ6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhb4Q91XZ6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb4Q91XZ6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pcdhb4Q91XZ6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.32■□□□□ 0.68
Pcdhb4Q91XZ6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.32■□□□□ 0.68
Pcdhb4Q91XZ6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.32■□□□□ 0.68
Pcdhb4Q91XZ6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb4Q91XZ6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb4Q91XZ6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb4Q91XZ6 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb4Q91XZ6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhb4Q91XZ6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb4Q91XZ6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb4Q91XZ6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb4Q91XZ6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb4Q91XZ6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhb4Q91XZ6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhb4Q91XZ6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb4Q91XZ6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb4Q91XZ6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb4Q91XZ6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb4Q91XZ6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb4Q91XZ6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb4Q91XZ6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb4Q91XZ6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb4Q91XZ6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb4Q91XZ6 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.3■□□□□ 0.68
Pcdhb4Q91XZ6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb4Q91XZ6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb4Q91XZ6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb4Q91XZ6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb4Q91XZ6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb4Q91XZ6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb4Q91XZ6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb4Q91XZ6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhb4Q91XZ6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb4Q91XZ6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
Pcdhb4Q91XZ6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb4Q91XZ6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb4Q91XZ6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb4Q91XZ6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb4Q91XZ6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Pcdhb4Q91XZ6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdhb4Q91XZ6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb4Q91XZ6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb4Q91XZ6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhb4Q91XZ6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb4Q91XZ6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb4Q91XZ6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb4Q91XZ6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Pcdhb4Q91XZ6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb4Q91XZ6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb4Q91XZ6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.27■□□□□ 0.68
Pcdhb4Q91XZ6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pcdhb4Q91XZ6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb4Q91XZ6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb4Q91XZ6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb4Q91XZ6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 8 ms